Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F04
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009858-1|AAH09858.1| 311|Homo sapiens mitochondrial ribosomal... 165 1e-40
BC000756-1|AAH00756.1| 263|Homo sapiens mitochondrial ribosomal... 165 1e-40
AB049635-1|BAB40840.1| 311|Homo sapiens mitochondrial ribosomal... 165 1e-40
AY007152-1|AAG02005.1| 211|Homo sapiens protein ( Homo sapiens ... 122 1e-27
AF132962-1|AAD27737.1| 311|Homo sapiens CGI-28 protein protein. 90 7e-18
AK023324-1|BAB14527.1| 190|Homo sapiens protein ( Homo sapiens ... 31 4.7
BC065009-1|AAH65009.1| 599|Homo sapiens ZNF343 protein protein. 30 8.2
BC063803-1|AAH63803.1| 149|Homo sapiens C-terminal binding prot... 30 8.2
BC011862-1|AAH11862.2| 485|Homo sapiens ZNF343 protein protein. 30 8.2
AL049650-4|CAI22574.1| 599|Homo sapiens zinc finger protein 343... 30 8.2
AK096911-1|BAC04892.1| 599|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK055734-1|BAB71000.1| 509|Homo sapiens protein ( Homo sapiens ... 30 8.2
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 27 9.2
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 27 9.2
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 27 9.2
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 27 9.2
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 27 9.5
>BC009858-1|AAH09858.1| 311|Homo sapiens mitochondrial ribosomal
protein L4 protein.
Length = 311
Score = 165 bits (401), Expect = 1e-40
Identities = 72/134 (53%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Frame = +3
Query: 249 ILKKEWEFP-PLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRK 425
+L+K E P P + +P + W+ +L +++++GL +LHP V+A PR+DI+H +WQ+
Sbjct: 47 VLRKV-ELPVPTHRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKN 105
Query: 426 YXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFML 605
+ +S+A TKTRAEVRGGG+KPWPQKG GRARHGSIRSPL+RGGGVAHGPR S+++ML
Sbjct: 106 FKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYML 165
Query: 606 PFHLRLHGLTTTLS 647
P +R GL L+
Sbjct: 166 PMKVRALGLKVALT 179
>BC000756-1|AAH00756.1| 263|Homo sapiens mitochondrial ribosomal
protein L4 protein.
Length = 263
Score = 165 bits (401), Expect = 1e-40
Identities = 72/134 (53%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Frame = +3
Query: 249 ILKKEWEFP-PLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRK 425
+L+K E P P + +P + W+ +L +++++GL +LHP V+A PR+DI+H +WQ+
Sbjct: 47 VLRKV-ELPVPTHRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKN 105
Query: 426 YXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFML 605
+ +S+A TKTRAEVRGGG+KPWPQKG GRARHGSIRSPL+RGGGVAHGPR S+++ML
Sbjct: 106 FKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYML 165
Query: 606 PFHLRLHGLTTTLS 647
P +R GL L+
Sbjct: 166 PMKVRALGLKVALT 179
>AB049635-1|BAB40840.1| 311|Homo sapiens mitochondrial ribosomal
protein L4 (L4mt) protein.
Length = 311
Score = 165 bits (401), Expect = 1e-40
Identities = 72/134 (53%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Frame = +3
Query: 249 ILKKEWEFP-PLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRK 425
+L+K E P P + +P + W+ +L +++++GL +LHP V+A PR+DI+H +WQ+
Sbjct: 47 VLRKV-ELPVPTHRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKN 105
Query: 426 YXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFML 605
+ +S+A TKTRAEVRGGG+KPWPQKG GRARHGSIRSPL+RGGGVAHGPR S+++ML
Sbjct: 106 FKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYML 165
Query: 606 PFHLRLHGLTTTLS 647
P +R GL L+
Sbjct: 166 PMKVRALGLKVALT 179
>AY007152-1|AAG02005.1| 211|Homo sapiens protein ( Homo sapiens
clone CDABP0091 mRNA sequence. ).
Length = 211
Score = 122 bits (293), Expect = 1e-27
Identities = 52/79 (65%), Positives = 64/79 (81%)
Frame = +3
Query: 411 IWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKS 590
+WQ+ + +S+A TKTRAEVRGGG+KPWPQKG GRARHGSIRSPL+RGGGVAHGPR S
Sbjct: 1 MWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTS 60
Query: 591 HFFMLPFHLRLHGLTTTLS 647
+++MLP +R GL L+
Sbjct: 61 YYYMLPMKVRALGLKVALT 79
>AF132962-1|AAD27737.1| 311|Homo sapiens CGI-28 protein protein.
Length = 311
Score = 89.8 bits (213), Expect = 7e-18
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Frame = +3
Query: 249 ILKKEWEFP-PLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRK 425
+L+K E P P + +P + W+ +L +++++GL +LHP V+A PR+DI+H +WQ+
Sbjct: 47 VLRKV-ELPVPTHRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKN 105
Query: 426 YXWVSWAHTKTRAEVRGGGKKPW--PQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFF 599
+ +S+A TKTRAEVRGGG KP + G A + S L R P S+++
Sbjct: 106 FKRISYAKTKTRAEVRGGGGKPLAAERHWAGPAWQHPL-SALAR-RRCCPWPPGPTSYYY 163
Query: 600 MLPFHLRLHGLTTTLS 647
MLP +R GL L+
Sbjct: 164 MLPMKVRALGLKVALT 179
>AK023324-1|BAB14527.1| 190|Homo sapiens protein ( Homo sapiens
cDNA FLJ13262 fis, clone OVARC1000912. ).
Length = 190
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 474 GGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
G GK P+ GLGR G S LFR G+A P
Sbjct: 123 GAGKPGAPRGGLGRGMKGKFGSGLFRFTGLAARP 156
>BC065009-1|AAH65009.1| 599|Homo sapiens ZNF343 protein protein.
Length = 599
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 420 RKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSG 584
++Y VS + RGGG KPW + R + SPL R PR G
Sbjct: 156 QQYSHVSCWFENAEGQERGGGSKPWSARTEERETSRAFPSPLQRQSA---SPRKG 207
>BC063803-1|AAH63803.1| 149|Homo sapiens C-terminal binding protein
2 pseudogene protein.
Length = 149
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 183 QIRLCSLNSAAVTTTTANKTINILKKEWEFPPLYTKPRE 299
+I LCS+ SAAV T + T +IL W LY RE
Sbjct: 56 EIALCSIPSAAVEETADSTTGHILNLYWGNRSLYQALRE 94
>BC011862-1|AAH11862.2| 485|Homo sapiens ZNF343 protein protein.
Length = 485
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 420 RKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSG 584
++Y VS + RGGG KPW + R + SPL R PR G
Sbjct: 42 QQYSHVSCWFENAEGQERGGGSKPWSARTEERETSRAFPSPLQRQSA---SPRKG 93
>AL049650-4|CAI22574.1| 599|Homo sapiens zinc finger protein 343
protein.
Length = 599
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 420 RKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSG 584
++Y VS + RGGG KPW + R + SPL R PR G
Sbjct: 156 QQYSHVSCWFENAEGQERGGGSKPWSARTEERETSRAFPSPLQRQSA---SPRKG 207
>AK096911-1|BAC04892.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ39592 fis, clone SKNSH2000819, moderately
similar to ZINC FINGER PROTEIN 133. ).
Length = 599
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 420 RKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSG 584
++Y VS + RGGG KPW + R + SPL R PR G
Sbjct: 156 QQYSHVSCWFENAEGQERGGGSKPWSARTEERETSRAFPSPLQRQSA---SPRKG 207
>AK055734-1|BAB71000.1| 509|Homo sapiens protein ( Homo sapiens
cDNA FLJ31172 fis, clone KIDNE2000051, moderately
similar to ZINC FINGER PROTEIN 133. ).
Length = 509
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 420 RKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSG 584
++Y VS + RGGG KPW + R + SPL R PR G
Sbjct: 66 QQYSHVSCWFENAEGQERGGGSKPWSARTEERETSRAFPSPLQRQSA---SPRKG 117
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 27.1 bits (57), Expect(2) = 9.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 583 PERGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPP 473
P G PPP G I P A P P G G PPP
Sbjct: 1343 PLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1379
Score = 21.0 bits (42), Expect(2) = 9.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 490 GFLPPPRTSAL 458
GFLPPP S L
Sbjct: 1404 GFLPPPLPSGL 1414
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 27.1 bits (57), Expect(2) = 9.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 583 PERGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPP 473
P G PPP G I P A P P G G PPP
Sbjct: 1343 PLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1379
Score = 21.0 bits (42), Expect(2) = 9.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 490 GFLPPPRTSAL 458
GFLPPP S L
Sbjct: 1404 GFLPPPLPSGL 1414
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 27.1 bits (57), Expect(2) = 9.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 583 PERGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPP 473
P G PPP G I P A P P G G PPP
Sbjct: 1343 PLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1379
Score = 21.0 bits (42), Expect(2) = 9.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 490 GFLPPPRTSAL 458
GFLPPP S L
Sbjct: 1404 GFLPPPLPSGL 1414
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 27.1 bits (57), Expect(2) = 9.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 583 PERGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPP 473
P G PPP G I P A P P G G PPP
Sbjct: 1343 PLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1379
Score = 21.0 bits (42), Expect(2) = 9.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 490 GFLPPPRTSAL 458
GFLPPP S L
Sbjct: 1404 GFLPPPLPSGL 1414
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 27.1 bits (57), Expect(2) = 9.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 583 PERGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPP 473
P G PPP G I P A P P G G PPP
Sbjct: 810 PLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 846
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 490 GFLPPPRTSAL 458
GFLPPP S L
Sbjct: 871 GFLPPPLPSGL 881
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,939,227
Number of Sequences: 237096
Number of extensions: 2684735
Number of successful extensions: 5891
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5889
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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