Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F04
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061407-1|AAL28955.1|  296|Drosophila melanogaster LD33485p pro...   191   8e-49
AE014134-2705|AAF53526.1|  296|Drosophila melanogaster CG5818-PA...   191   8e-49
AE014297-3484|ABI31201.1|  133|Drosophila melanogaster CG13606-P...    30   2.4  
AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-P...    29   4.1  
AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone rec...    29   7.2  
AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-P...    29   7.2  
BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p pro...    28   9.5  
AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-P...    28   9.5  

>AY061407-1|AAL28955.1|  296|Drosophila melanogaster LD33485p
           protein.
          Length = 296

 Score =  191 bits (465), Expect = 8e-49
 Identities = 89/149 (59%), Positives = 111/149 (74%), Gaps = 2/149 (1%)
 Frame = +3

Query: 207 SAAVTTTTANKTINILKKEWE--FPPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAP 380
           +A V    A ++  IL +++    P      R+ WI N D+V E+K+GLIELHP V+AA 
Sbjct: 34  AATVGAPPATRSPLILPQDYTDCLPVSRNTARQAWIENTDAVAERKVGLIELHPDVFAAQ 93

Query: 381 PRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 560
           PR+DII  NV WQ KY +VS AHTKTRAEVRGGG+KPWPQKG GRARHGS+RSP+ +GGG
Sbjct: 94  PRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKPWPQKGGGRARHGSLRSPMLKGGG 153

Query: 561 VAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
           V HGPRS  +HF+MLPF+ R+ GLT+TLS
Sbjct: 154 VVHGPRSPTTHFYMLPFYKRVLGLTSTLS 182


>AE014134-2705|AAF53526.1|  296|Drosophila melanogaster CG5818-PA
           protein.
          Length = 296

 Score =  191 bits (465), Expect = 8e-49
 Identities = 89/149 (59%), Positives = 111/149 (74%), Gaps = 2/149 (1%)
 Frame = +3

Query: 207 SAAVTTTTANKTINILKKEWE--FPPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAP 380
           +A V    A ++  IL +++    P      R+ WI N D+V E+K+GLIELHP V+AA 
Sbjct: 34  AATVGAPPATRSPLILPQDYTDCLPVSRNTARQAWIENTDAVAERKVGLIELHPDVFAAQ 93

Query: 381 PRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 560
           PR+DII  NV WQ KY +VS AHTKTRAEVRGGG+KPWPQKG GRARHGS+RSP+ +GGG
Sbjct: 94  PRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKPWPQKGGGRARHGSLRSPMLKGGG 153

Query: 561 VAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
           V HGPRS  +HF+MLPF+ R+ GLT+TLS
Sbjct: 154 VVHGPRSPTTHFYMLPFYKRVLGLTSTLS 182


>AE014297-3484|ABI31201.1|  133|Drosophila melanogaster CG13606-PB,
           isoform B protein.
          Length = 133

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -3

Query: 577 RGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPPRTSALVLVCAQETHXYF 422
           RGP   PP  +  D ++          G+GF+PP +T+A+ +  A +   YF
Sbjct: 56  RGPVVFPP--SPPDAVDESSGVVVGASGYGFVPPQQTAAVAVAAAGDPSTYF 105


>AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-PA
           protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 493 HGFLPPPRTSALVLVCAQETHXYFLCHITLLW 398
           +GF+P PR  A    C+  +     CH+   W
Sbjct: 159 YGFMPHPRNCAYFYYCSSGSKLVHRCHLNYTW 190


>AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone
           receptor co-activatorTaiman protein.
          Length = 2035

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 574 GPWATPPPRNRGDLIEPCLARPNPFCGHGFLP 479
           G W    P +R  +  P ++ P P  GHGF P
Sbjct: 874 GAWTDSRPNSRASVATP-VSTPRPPSGHGFSP 904


>AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-PA
           protein.
          Length = 2047

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 574 GPWATPPPRNRGDLIEPCLARPNPFCGHGFLP 479
           G W    P +R  +  P ++ P P  GHGF P
Sbjct: 874 GAWTDSRPNSRASVATP-VSTPRPPSGHGFSP 904


>BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p
           protein.
          Length = 1449

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 555 HHEIGVILLSHVWRDPTLSVATVSCLHPELLLSSWYVP-RKPXY 427
           H +    L SHV R    SV+ V  L+P  LLSS Y P R+P +
Sbjct: 833 HQDARGSLRSHVIRRYIASVSGVLQLYPGCLLSSSYDPTRRPWF 876


>AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-PA
           protein.
          Length = 1449

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 555 HHEIGVILLSHVWRDPTLSVATVSCLHPELLLSSWYVP-RKPXY 427
           H +    L SHV R    SV+ V  L+P  LLSS Y P R+P +
Sbjct: 833 HQDARGSLRSHVIRRYIASVSGVLQLYPGCLLSSSYDPTRRPWF 876


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,231,257
Number of Sequences: 53049
Number of extensions: 779446
Number of successful extensions: 2043
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)