Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E23
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003581-1|AAH03581.1| 101|Homo sapiens ubiquitin related modif... 100 3e-21
AL359091-10|CAI13493.1| 101|Homo sapiens ubiquitin related modi... 100 3e-21
AL359091-9|CAI13492.1| 63|Homo sapiens ubiquitin related modif... 42 9e-04
AK125847-1|BAC86316.1| 917|Homo sapiens protein ( Homo sapiens ... 31 1.6
BC101065-1|AAI01066.1| 581|Homo sapiens LRRC15 protein protein. 29 8.8
BC101064-1|AAI01065.1| 581|Homo sapiens leucine rich repeat con... 29 8.8
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 29 8.8
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 29 8.8
AB071037-1|BAB84587.1| 581|Homo sapiens Lib protein. 29 8.8
>BC003581-1|AAH03581.1| 101|Homo sapiens ubiquitin related modifier
1 homolog (S. cerevisiae) protein.
Length = 101
Score = 100 bits (239), Expect = 3e-21
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +3
Query: 153 RRLKTFLPDSQNQNWTLKELLIWLKDNLLVEREXLFLKDDSVRPGILVLINEEXWELHGQ 332
++ + LP Q + W ++ LLIW+K NLL ER LF++ DSVRPGILVLIN+ WEL G+
Sbjct: 23 KKHRVTLP-GQEEPWDIRNLLIWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGE 81
Query: 333 LNYELKENDKIMFISTLHGG 392
L+Y+L++ D ++FISTLHGG
Sbjct: 82 LDYQLQDQDSVLFISTLHGG 101
Score = 39.5 bits (88), Expect = 0.006
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 65 MAETLTVXVMFGGGAELLFNKVKRKEIALPPFED 166
MA L+V V FGGGAELLF+ +K+ + LP E+
Sbjct: 1 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEE 34
>AL359091-10|CAI13493.1| 101|Homo sapiens ubiquitin related
modifier 1 homolog (S. cerevisiae) protein.
Length = 101
Score = 100 bits (239), Expect = 3e-21
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +3
Query: 153 RRLKTFLPDSQNQNWTLKELLIWLKDNLLVEREXLFLKDDSVRPGILVLINEEXWELHGQ 332
++ + LP Q + W ++ LLIW+K NLL ER LF++ DSVRPGILVLIN+ WEL G+
Sbjct: 23 KKHRVTLP-GQEEPWDIRNLLIWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGE 81
Query: 333 LNYELKENDKIMFISTLHGG 392
L+Y+L++ D ++FISTLHGG
Sbjct: 82 LDYQLQDQDSVLFISTLHGG 101
Score = 39.5 bits (88), Expect = 0.006
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 65 MAETLTVXVMFGGGAELLFNKVKRKEIALPPFED 166
MA L+V V FGGGAELLF+ +K+ + LP E+
Sbjct: 1 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEE 34
>AL359091-9|CAI13492.1| 63|Homo sapiens ubiquitin related modifier
1 homolog (S. cerevisiae) protein.
Length = 63
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 153 RRLKTFLPDSQNQNWTLKELLIWLKDNLLVEREXLFLKDDSV 278
++ + LP Q + W ++ LLIW+K NLL ER LF++ DSV
Sbjct: 23 KKHRVTLP-GQEEPWDIRNLLIWIKKNLLKERPELFIQGDSV 63
Score = 39.5 bits (88), Expect = 0.006
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 65 MAETLTVXVMFGGGAELLFNKVKRKEIALPPFED 166
MA L+V V FGGGAELLF+ +K+ + LP E+
Sbjct: 1 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEE 34
>AK125847-1|BAC86316.1| 917|Homo sapiens protein ( Homo sapiens
cDNA FLJ43859 fis, clone TESTI4007382. ).
Length = 917
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -3
Query: 294 RVYQVGQNHPSRTTXLFPPAGCLLTKSTALLTSNSDFENPVKMSSNGGSAISFLFTLLKS 115
R ++H T PP C +T+S + LT F + + +GGS+ S T
Sbjct: 285 RTDSCARHHGPPTPSALPPEDCTVTQSKSNLTVLKTFPEMLSLGGSGGSSTSAPTTKGID 344
Query: 114 NSAP 103
+S P
Sbjct: 345 HSCP 348
>BC101065-1|AAI01066.1| 581|Homo sapiens LRRC15 protein protein.
Length = 581
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 328 PWSSQXSSLINTSIPGRTESSFKNNXSLSTSRLSFNQIN 212
PW++ ++NT I ES F N +L R+ N+++
Sbjct: 52 PWNAMSLQILNTHITELNESPFLNISALIALRIEKNELS 90
>BC101064-1|AAI01065.1| 581|Homo sapiens leucine rich repeat
containing 15 protein.
Length = 581
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 328 PWSSQXSSLINTSIPGRTESSFKNNXSLSTSRLSFNQIN 212
PW++ ++NT I ES F N +L R+ N+++
Sbjct: 52 PWNAMSLQILNTHITELNESPFLNISALIALRIEKNELS 90
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -2
Query: 367 MILSFSLSS*FNCPWSSQXSSLINTSIPGRTESSF 263
M LS SS WSSQ SS + +P RT S F
Sbjct: 125 MCLSSGTSSTSYSSWSSQTSSTSSMCLPSRTSSIF 159
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -2
Query: 367 MILSFSLSS*FNCPWSSQXSSLINTSIPGRTESSF 263
M LS SS WSSQ SS + +P RT S F
Sbjct: 125 MCLSSGTSSTSYSSWSSQTSSTSSMCLPSRTSSIF 159
>AB071037-1|BAB84587.1| 581|Homo sapiens Lib protein.
Length = 581
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 328 PWSSQXSSLINTSIPGRTESSFKNNXSLSTSRLSFNQIN 212
PW++ ++NT I ES F N +L R+ N+++
Sbjct: 52 PWNAMSLQILNTHITELNESPFLNISALIALRIEKNELS 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,844,878
Number of Sequences: 237096
Number of extensions: 1042599
Number of successful extensions: 2335
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2335
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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