Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E23
         (491 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical pr...    29   1.4  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     27   5.6  
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    27   7.4  
Z74472-7|CAA98944.1|  182|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical
           protein ZC443.5 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/77 (33%), Positives = 34/77 (44%)
 Frame = +3

Query: 108 RNCSLIK*RGKKLHCRRLKTFLPDSQNQNWTLKELLIWLKDNLLVEREXLFLKDDSVRPG 287
           RN  ++K  G  L     KT L DS+      K +L   K +   +R    L+D  V P 
Sbjct: 402 RNAHMLKRHGGCLQYH--KTMLGDSEQLLKAFKTVLTERKYSENAQRLARILRDQPVSPK 459

Query: 288 ILVLINEEXWELHGQLN 338
            LVL + E    HG LN
Sbjct: 460 DLVLKHCEFAVEHGALN 476


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -3

Query: 243 PPAGCLLTKSTALLTSNSDFENPVKMSSNGGSAISFLFTLLKSNSAPPPN 94
           PPAG  +  S+      +D+E+P +M+ + G   S    L+K+   P P+
Sbjct: 21  PPAGMPMMTSSHEHDYTNDYEDPEEMARSRGEGFS-NHLLIKTTPPPQPH 69


>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 270  DSVRPGILVLINEEXWELHGQLNYELKENDKIMFISTLHG 389
            DS RPG  VL+       HG ++Y+L+ N     + TL G
Sbjct: 1599 DSTRPGTPVLVLNALH--HGTVSYKLEPNCTFFEVHTLSG 1636


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 270  DSVRPGILVLINEEXWELHGQLNYELKENDKIMFISTLHG 389
            DS RPG  VL+       HG ++Y+L+ N     + TL G
Sbjct: 1599 DSTRPGTPVLVLNALH--HGTVSYKLEPNCTFFEVHTLSG 1636


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 270  DSVRPGILVLINEEXWELHGQLNYELKENDKIMFISTLHG 389
            DS RPG  VL+       HG ++Y+L+ N     + TL G
Sbjct: 1599 DSTRPGTPVLVLNALH--HGTVSYKLEPNCTFFEVHTLSG 1636


>Z74472-7|CAA98944.1|  182|Caenorhabditis elegans Hypothetical
           protein F23H12.7 protein.
          Length = 182

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 213 LIWLKDNLLVEREXLFLKDDS 275
           L+WL+DN++  R  L   DD+
Sbjct: 157 LLWLQDNMMAPRSALIKNDDN 177


>U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical
           protein F36H5.5 protein.
          Length = 576

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 285 GILVL-INEEXWELHGQLNYELKENDKI 365
           G LV  + ++ +ELH  + YEL EN KI
Sbjct: 481 GYLVFNLVDQLYELHAPVYYELSENTKI 508


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,413,052
Number of Sequences: 27780
Number of extensions: 176451
Number of successful extensions: 446
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)