Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E22
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.71 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   3.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   3.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   3.8  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 298 DPSWHPHYLQMLQTSKVFQLVIY*RNSRKPLR 203
           DP ++P+Y Q LQ + ++  + +    R PL+
Sbjct: 35  DPWYNPYYYQYLQNAALYHKLQFRGPPRTPLQ 66


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 526  RGWSGSRMPGRSIGPPDPIGEDEFIGFDTK-VLQLRSLLIMK 648
            +GW+  + P R +GP    G D+++ FD + +++ +S  I K
Sbjct: 1689 QGWTVVQDPNRRMGPYAYKG-DQWVSFDDREMIKRKSEFIRK 1729



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 523  ERGWSGSRMPGRSIGP 570
            +RGW+ +R P   IGP
Sbjct: 2611 KRGWTVTRDPQGRIGP 2626


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 100 MCSKILTLSNVLSRPMQLFFKPNATSNLKPNINVTSVAC 216
           MC  + T   V S    L    + T N+ PN +V S  C
Sbjct: 112 MCESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVC 150


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 100 MCSKILTLSNVLSRPMQLFFKPNATSNLKPNINVTSVAC 216
           MC  + T   V S    L    + T N+ PN +V S  C
Sbjct: 112 MCESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVC 150


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 54  IVYFKAEL*FCFNFYYV 104
           +++FK    +CFN+Y +
Sbjct: 67  LMFFKEASLYCFNYYVI 83


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 100 MCSKILTLSNVLSRPMQLFFKPNATSNLKPNINVTSVAC 216
           MC  + T   V S    L    + T N+ PN +V S  C
Sbjct: 112 MCESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVC 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,391
Number of Sequences: 336
Number of extensions: 3133
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)