Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E22
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 31 0.54
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 31 0.54
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 31 0.94
U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeas... 29 3.8
Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL110479-28|CAJ76967.1| 213|Caenorhabditis elegans Hypothetical... 28 5.0
AL110479-27|CAB60322.2| 333|Caenorhabditis elegans Hypothetical... 28 5.0
AC087078-5|AAK66024.2| 191|Caenorhabditis elegans Hypothetical ... 28 5.0
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 28 6.6
Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical pr... 27 8.7
U52003-8|AAM97990.1| 441|Caenorhabditis elegans Hypothetical pr... 27 8.7
U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL132846-4|CAB60347.1| 328|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Frame = +1
Query: 247 KLWKSVTSVSNXXXXXXXXXXXXXXXXXXLNRGQVIGTGKVNMLWPGLSAPVIRGRELLK 426
+LWK++TSVS LNR IG+ + + + GL+AP IR RE
Sbjct: 7 ELWKTLTSVSKSGQKKGRRNTRQPVRP--LNRFYRIGSSPMKIEFAGLNAP-IRMRETEN 63
Query: 427 QQ----------KLPDDPERMEKLIKIRDSMTKFR-RLKLSSIERGWSGSRMPGRSIGPP 573
Q ++ D +K+++ RD+ K R R KL +ERG+SG+++ G+ +G P
Sbjct: 64 QNLMSIAEQTEDEIRDSMGGTKKILEERDTGKKKRNREKLHPMERGFSGTQLVGQKLGAP 123
Query: 574 DPIGEDEFIGFDTKVLQLR 630
P+ F F+T L+++
Sbjct: 124 PPLDGVNFDDFETYCLEVK 142
>Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Frame = +1
Query: 247 KLWKSVTSVSNXXXXXXXXXXXXXXXXXXLNRGQVIGTGKVNMLWPGLSAPVIRGRELLK 426
+LWK++TSVS LNR IG+ + + + GL+AP IR RE
Sbjct: 7 ELWKTLTSVSKSGQKKGRRNTRQPVRP--LNRFYRIGSSPMKIEFAGLNAP-IRMRETEN 63
Query: 427 QQ----------KLPDDPERMEKLIKIRDSMTKFR-RLKLSSIERGWSGSRMPGRSIGPP 573
Q ++ D +K+++ RD+ K R R KL +ERG+SG+++ G+ +G P
Sbjct: 64 QNLMSIAEQTEDEIRDSMGGTKKILEERDTGKKKRNREKLHPMERGFSGTQLVGQKLGAP 123
Query: 574 DPIGEDEFIGFDTKVLQLR 630
P+ F F+T L+++
Sbjct: 124 PPLDGVNFDDFETYCLEVK 142
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 415 ELLKQQKLPDDPERMEKLIKIRDSMTKFRRLKLSSIERGWSGSRM 549
EL +Q+KL +R K K+RDS + ++ L +E G S S++
Sbjct: 411 ELQRQEKLEQLAQRFHKKAKLRDSWLRSVQVVLEEMEHGRSASQV 455
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 415 ELLKQQKLPDDPERMEKLIKIRDSMTKFRRLKLSSIERGWSGSRM 549
EL +Q+KL +R K K+RDS + ++ L +E G S S++
Sbjct: 411 ELQRQEKLEQLAQRFHKKAKLRDSWLRSVQVVLEEMEHGRSASQV 455
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 415 ELLKQQKLPDDPERMEKLIKIRDSMTKFRRLKLSSIERGWSGSRM 549
EL +Q+KL +R K K+RDS + ++ L +E G S S++
Sbjct: 411 ELQRQEKLEQLAQRFHKKAKLRDSWLRSVQVVLEEMEHGRSASQV 455
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 30.7 bits (66), Expect = 0.94
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 442 DDPERMEKLIKIRDSMTKFRRLKLSSIERGWSGSRMPGRSIGPPDPIGEDEFIGFDTKVL 621
+DPE ++ +++ R K + IER S R+P + P+ IG+DE DT +
Sbjct: 1490 EDPEVIQMIVRHRMEQHKLLEKQRVEIERLRSKIRVPRATSVNPEMIGDDE---ADTTLT 1546
Query: 622 QLRSLL 639
L+S L
Sbjct: 1547 ALQSAL 1552
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 30.7 bits (66), Expect = 0.94
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 442 DDPERMEKLIKIRDSMTKFRRLKLSSIERGWSGSRMPGRSIGPPDPIGEDEFIGFDTKVL 621
+DPE ++ +++ R K + IER S R+P + P+ IG+DE DT +
Sbjct: 1651 EDPEVIQMIVRHRMEQHKLLEKQRVEIERLRSKIRVPRATSVNPEMIGDDE---ADTTLT 1707
Query: 622 QLRSLL 639
L+S L
Sbjct: 1708 ALQSAL 1713
>U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 1 protein.
Length = 2500
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 412 RELLKQ-QKLPDDPERMEKLIKIRDSMTKFRRLKLSSIERGWSGSRMPGRSIGPPDPIGE 588
R+LLK Q P P M ++ S+ + +S GW + P R GPP P +
Sbjct: 791 RDLLKVVQPAPPPPSSMSPSTQMMRSLIPPLTQRQNS-NSGWHAAPAPQRPSGPPTPQQQ 849
Query: 589 DEFIG 603
+F G
Sbjct: 850 MDFRG 854
>Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical
protein C26C6.4b protein.
Length = 341
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 SIQVSDSDPTCSLATTLLGTRITYRCYRLPKF 247
S S P S+ T L G R YRC+RLP++
Sbjct: 201 SFMRSHQSPDSSIMTYLCGHR-NYRCHRLPRW 231
>Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical
protein C26C6.4a protein.
Length = 424
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 SIQVSDSDPTCSLATTLLGTRITYRCYRLPKF 247
S S P S+ T L G R YRC+RLP++
Sbjct: 284 SFMRSHQSPDSSIMTYLCGHR-NYRCHRLPRW 314
>Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical
protein W07A12.5 protein.
Length = 278
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 523 ERGWSGSRMPGRSIGPPDPIGEDEFIG 603
++G +G +PG +GPP P G+D IG
Sbjct: 160 KKGKTGQSLPG-PVGPPGPPGKDGSIG 185
>AL110479-28|CAJ76967.1| 213|Caenorhabditis elegans Hypothetical
protein Y105C5B.6b protein.
Length = 213
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 46 DIKLFTLKQSSDSVSTFIMCSKILTLSNVLSRPMQLFFK-PNATSNLKPNIN 198
++KLF + + ++ I+C I+ +++L+ P+ F+ NA S+L IN
Sbjct: 124 EVKLFFMSSITVAIQISILCLVIVYATSLLNFPLDKFYLFYNAISDLYAGIN 175
>AL110479-27|CAB60322.2| 333|Caenorhabditis elegans Hypothetical
protein Y105C5B.6a protein.
Length = 333
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 46 DIKLFTLKQSSDSVSTFIMCSKILTLSNVLSRPMQLFFK-PNATSNLKPNIN 198
++KLF + + ++ I+C I+ +++L+ P+ F+ NA S+L IN
Sbjct: 244 EVKLFFMSSITVAIQISILCLVIVYATSLLNFPLDKFYLFYNAISDLYAGIN 295
>AC087078-5|AAK66024.2| 191|Caenorhabditis elegans Hypothetical
protein Y34F4.5 protein.
Length = 191
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 34 NEYSDIKLFTLKQSSDSVSTFIMCSKILTLSNVLSRPMQLFFKPNATSNLKP-NINVTSV 210
+ ++D ++ QS ++T I+CS + LS L + + N+T P N + TSV
Sbjct: 126 SRFNDNTVYLSYQSLLLITTIIVCSINIALSRRLVVQVARTIRQNSTHTANPFNFDTTSV 185
Query: 211 ACVS 222
+S
Sbjct: 186 YSIS 189
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 651 SFHDQQRS*LENFSVEANEFIFPYGIWRP 565
S DQ+R EN ++ E +F G+W P
Sbjct: 1018 SIEDQERETRENDKIDDGEELFNIGVWDP 1046
>Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical
protein C55A6.2 protein.
Length = 677
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 367 VNMLWPGLSAPVIRGRELLKQQKLPDDPERMEKLIKIR 480
VN++W G +R REL+ Q+L P E K R
Sbjct: 101 VNVIWMGAPVKSVRMRELMPWQRLNQFPRSTELTKKDR 138
>U52003-8|AAM97990.1| 441|Caenorhabditis elegans Hypothetical
protein ZK381.5b protein.
Length = 441
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 325 FGSYLLPCHDPSWHPHYLQMLQTSKVFQLVIY*RNSRKPLRL 200
FG L SWH H+ Q Q + V Y + + KP+ L
Sbjct: 138 FGDECLEAEGRSWHFHHFQCAQCNDVLADQKYMQRANKPVCL 179
>U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical
protein ZK381.5a protein.
Length = 555
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 325 FGSYLLPCHDPSWHPHYLQMLQTSKVFQLVIY*RNSRKPLRL 200
FG L SWH H+ Q Q + V Y + + KP+ L
Sbjct: 252 FGDECLEAEGRSWHFHHFQCAQCNDVLADQKYMQRANKPVCL 293
>AL132846-4|CAB60347.1| 328|Caenorhabditis elegans Hypothetical
protein Y43D4A.6 protein.
Length = 328
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 9/52 (17%)
Frame = +1
Query: 370 NMLWPGLSAPVIRG-RELLKQ--------QKLPDDPERMEKLIKIRDSMTKF 498
N +W GLS PV+R ++LLK+ +++ DP +E L + R++ TKF
Sbjct: 228 NCIWYGLSTPVVRFLKKLLKENVNERATIEEIESDP-WLEDLEEERENCTKF 278
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -2
Query: 375 HINFSCANYLASIQVSDSDPTCSLATTLL--GTRITYRCYRL 256
H N +YL + D DP CSL T L G I C L
Sbjct: 32 HPNCVVQSYLTWLTDQDYDPNCSLCKTTLAEGDTIRLNCLHL 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,711,881
Number of Sequences: 27780
Number of extensions: 268434
Number of successful extensions: 729
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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