Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E17
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z68301-1|CAA92624.1|  360|Caenorhabditis elegans Hypothetical pr...    27   8.7  
X72943-1|CAA51448.1|  360|Caenorhabditis elegans Wnt-2 protein p...    27   8.7  

>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 21/71 (29%), Positives = 26/71 (36%)
 Frame = +2

Query: 29  TSTMDEHTSTDTVQESSNPTLHVEAPTDCDFNLTPATNTTAIF*KLXGL*LDXI*KVQ*K 208
           T+T      T T  E +  T      T     L P T+T  I   L  +  D + K    
Sbjct: 469 TTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTTSTPKIVVNLTPIYPDMLMKANKV 528

Query: 209 SFIAKLGIWTI 241
             I   GIWTI
Sbjct: 529 PMIPAYGIWTI 539


>Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK858.6 protein.
          Length = 619

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 419 FYYHXH*KIFSGMIISITLFTYFCID*VNFFFLSGSVSLKINCIHFFL 276
           FYY+    I  G + ++  F+Y  +  + FFF++G++    +  HFFL
Sbjct: 565 FYYNTKLTI-EGFVPTVLYFSYSSLIALTFFFMTGTIGFYAS--HFFL 609


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/45 (37%), Positives = 19/45 (42%)
 Frame = +2

Query: 14  VKQKVTSTMDEHTSTDTVQESSNPTLHVEAPTDCDFNLTPATNTT 148
           VK   T+T    TST T    + PT     PT      TP T TT
Sbjct: 58  VKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTT--TTTPTTTTT 100


>Z68301-1|CAA92624.1|  360|Caenorhabditis elegans Hypothetical
           protein W01B6.1 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 99  STCNVGFELSCTVSVEVCSSIVLVTFC 19
           S CN  FE  C V  + C+++  V  C
Sbjct: 333 SKCNCKFEWCCKVVCQTCNNVTQVDIC 359


>X72943-1|CAA51448.1|  360|Caenorhabditis elegans Wnt-2 protein
           protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 132 GVKLKSQSVGASTCNVGFELSCTVSVEVCSSIVLVTFC 19
           G    +Q V A  CN  FE  C V  + C+++  V  C
Sbjct: 323 GYNTYTQEVKAK-CNCKFEWCCKVVCQTCNNVTQVDIC 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,049,445
Number of Sequences: 27780
Number of extensions: 237529
Number of successful extensions: 489
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)