Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E12
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.004
03_02_0484 + 8805053-8805538 38 0.005
03_02_0483 - 8804021-8804485 38 0.005
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 38 0.005
03_02_0478 + 8775892-8776377 37 0.012
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.037
01_01_0229 - 1943473-1943922 35 0.048
02_02_0077 - 6586638-6587165 35 0.064
01_01_0231 + 1951047-1951499 35 0.064
01_01_0227 + 1933247-1933699 33 0.15
12_02_0270 - 16626301-16626630 32 0.45
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.60
09_02_0098 + 4235938-4237113 30 1.4
07_01_1127 + 10456895-10457388,10457488-10458112 29 3.2
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231... 29 3.2
04_01_0252 - 3329712-3331061 29 4.2
09_04_0139 + 15030753-15031208,15031298-15031523,15031599-150319... 28 5.6
01_01_0670 - 5131007-5131873 28 5.6
04_01_0106 + 1102880-1105691,1105781-1105806 27 9.7
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 27 9.7
03_02_0735 + 10811326-10812342,10813199-10813555,10813962-108142... 27 9.7
01_01_0900 + 7091970-7092068,7092175-7093131,7093210-7093968,709... 27 9.7
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +2
Query: 320 DVQHFAPEEISVKTADGYIV-VEGKHX----EKKDQHGYISR---QFTRRYALPEGCTAE 475
DV EE+ V+ DG I+ + G+ EK D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 476 SVESRLSSDGVLSVIAPRKVP 538
+++ + +GVL+V P++ P
Sbjct: 128 QIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +2
Query: 320 DVQHFAPEEISVKTADGYIV-VEGKHX----EKKDQHGYISR---QFTRRYALPEGCTAE 475
DV EE+ V+ DG ++ + G+ EK D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 476 SVESRLSSDGVLSVIAPRKVP 538
+++ + +GVL+V P++ P
Sbjct: 130 QIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +2
Query: 320 DVQHFAPEEISVKTADGYIV-VEGKHX----EKKDQHGYISR---QFTRRYALPEGCTAE 475
DV EE+ V+ DG ++ + G+ EK D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 476 SVESRLSSDGVLSVIAPRKVP 538
+++ + +GVL+V P++ P
Sbjct: 123 QIKASM-ENGVLTVTVPKEEP 142
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Frame = +2
Query: 239 PWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQ-- 412
P R LA + + D + ++ D+ + EE+ V D +V+ G+H +++ +
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 413 ----HGYISRQ----FTRRYALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIP 568
G+ + + R ALP+ C V + L +GVL V P+ E ERK+
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPK-----TEVERKVI 235
Query: 569 IAQTGPVRKEVKDQSNGD 622
Q ++K V + + +
Sbjct: 236 DVQIKYLKKLVMENCSDE 253
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +2
Query: 320 DVQHFAPEEISVKTADGYIV-VEGKHX----EKKDQHGYISR---QFTRRYALPEGCTAE 475
DV EE+ V+ DG I+ + G+ EK DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 476 SVESRLSSDGVLSVIAPRK 532
+++ + +GVL+V P++
Sbjct: 130 QIKASM-ENGVLTVTVPKE 147
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.037
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +2
Query: 320 DVQHFAPEEISVKTADGYI-VVEGKHX-EKKDQHGYISR------QFTRRYALPEGCTAE 475
D+ EE+ V+ +G + V+ G+ EK+D++ R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 476 SVESRLSSDGVLSVIAPR 529
V++ L +GVL+V P+
Sbjct: 119 QVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.048
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +2
Query: 320 DVQHFAPEEISVKTADGYI-VVEGKHX-EKKDQHGYISR------QFTRRYALPEGCTAE 475
D+ EE+ V+ +G + V+ G+ EK+D++ R QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 476 SVESRLSSDGVLSVIAPR 529
V++ + +GVL+V P+
Sbjct: 118 QVKASM-ENGVLTVTVPK 134
>02_02_0077 - 6586638-6587165
Length = 175
Score = 34.7 bits (76), Expect = 0.064
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 13/134 (9%)
Frame = +2
Query: 221 SREYYRPWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIV-VEGKHX 397
+R Y R R +A D+ S + +D+ AP ++ V+ DG ++ + G+
Sbjct: 36 TRAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEVEDGNVLAISGERR 93
Query: 398 EKK---DQHG----YISRQ-----FTRRYALPEGCTAESVESRLSSDGVLSVIAPRKVPP 541
D G Y+ + F RR+ LPE + V + DGVL+V +K PP
Sbjct: 94 RPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPP 152
Query: 542 AVEGERKIPIAQTG 583
+ R + + G
Sbjct: 153 EPKKPRVVEVKVAG 166
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.064
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +2
Query: 320 DVQHFAPEEISVKTADGYI-VVEGKHX-EKKDQHGYISR------QFTRRYALPEGCTAE 475
D+ EE+ V+ +G + V+ G+ EK+D++ R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 476 SVESRLSSDGVLSVIAPR 529
V++ + +GVL+V P+
Sbjct: 119 QVKAGM-ENGVLTVTVPK 135
>01_01_0227 + 1933247-1933699
Length = 150
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 380 VEGKHXEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPRK 532
V+GK+ E+ S +F RR+ LP G + V + + +GVL+V P++
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>12_02_0270 - 16626301-16626630
Length = 109
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 272 GLEPRQQGDATGGSILCSARGPAAALRKSSGVSPKPKC*SMRR 144
G PR D G +L +AR A + S KP C S+RR
Sbjct: 32 GSPPRAHVDLAVGRVLATARASALTSSRPSSTKTKPVCSSLRR 74
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 395 RVCLQPRCSRPPF*QRFLPGRNAGR 321
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>09_02_0098 + 4235938-4237113
Length = 391
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 365 PPF*QRFLPGRNAGRPGLLGTYPYHF*CWSQGLEPRQQGDATGGSILCSARGPAAALRKS 186
PP F P R+A R + + P+HF Q + ++ D S + S P+AA +
Sbjct: 220 PPLLSLFPPARDASRIAAVCSDPHHFAVTMQYMPKQEMADLIWSSEIPSIHIPSAAGGQH 279
Query: 185 SGVSP 171
G P
Sbjct: 280 VGTVP 284
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 395 RVCLQPRCSRPPF*QRFLPGRNAGR 321
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>01_06_0359 +
28722524-28722613,28722794-28722863,28723062-28723159,
28724029-28724167,28724243-28724370,28724500-28724592,
28724707-28724757,28725405-28725470,28725568-28725633,
28725900-28725977,28726248-28726427,28726502-28726577,
28726660-28726823,28727569-28727931
Length = 553
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 148 LMDQHFGLGLTPEDFLSAAAGPLAEQRILPPVASP 252
L QH G+ P FL A GP + P A+P
Sbjct: 512 LQPQHAGIAQAPNPFLDAGFGPFPASNGMHPQANP 546
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 395 RVCLQPRCSRPPF*QRFLPGRNAGR 321
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>09_04_0139 +
15030753-15031208,15031298-15031523,15031599-15031981,
15032353-15032685,15032902-15033010,15033089-15033465
Length = 627
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +2
Query: 230 YYRPWRHLAAAARDLG--SSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEK 403
+ R W+ + DL S+ SD D F ++LD +H+A + I AD + + H
Sbjct: 425 HIRTWKRKYSKIADLRKLSAALSDDDNFIISLDHKHYA-DHIKDHKADAEYLNKPIHNYS 483
Query: 404 KDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPR 529
K + + T +YA + S L+ + S AP+
Sbjct: 484 KMLVIFGNSLATGKYAKGSATGSASRVHALNEENGASSSAPK 525
>01_01_0670 - 5131007-5131873
Length = 288
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 108 PWLFDYEIERPRSPHGSTFRLGADSGRFSQCC 203
P ++ I RP++P R G S RFS CC
Sbjct: 27 PKMYQRPIYRPQAPAAKRRRGGRSSCRFSCCC 58
>04_01_0106 + 1102880-1105691,1105781-1105806
Length = 945
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 WRHLAAAARDLGSSIKSDKD-KFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEK 403
W+ LAA ++ + +++ ++ K Q N+D+ +P I + + + + KH K
Sbjct: 119 WQRLAAELKEAQNRLQNLRNLKVQYNIDLSEESPSSIRYEDSQVHTIQHIKHNNK 173
>03_02_1023 +
13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 491 LSSDGVLSVIAPRKVPPAVEGERKIPIAQTGPVRKEVKDQSNGDKA*VVSS 643
L DG SV+ KV V IPI T P+R E + +G + ++ S
Sbjct: 403 LLMDGATSVLEVVKVATVVSAN--IPIQSTSPIRAEAGIKISGSQCNIIIS 451
>03_02_0735 +
10811326-10812342,10813199-10813555,10813962-10814225,
10814894-10815010,10815796-10815944,10816315-10816606,
10816681-10816845,10817106-10817357
Length = 870
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 178 TPEDFLSAAAGPLAEQRILP-PV-ASPCCRGSRP 273
T + FLS A PL RILP P S RG RP
Sbjct: 356 TSQSFLSPAPNPLLRPRILPFPAGGSVSLRGRRP 389
>01_01_0900 +
7091970-7092068,7092175-7093131,7093210-7093968,
7094322-7094366
Length = 619
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3
Query: 462 AVRLNLWSPGCLQMVCCL*SHPGRCRQQWRVNARFRSPKPDP 587
AVR NL + L C GR + WRV AR R+ DP
Sbjct: 220 AVRPNLTTYNILVKAWC---DAGRLEEAWRVVARMRASGADP 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,796,607
Number of Sequences: 37544
Number of extensions: 452552
Number of successful extensions: 1444
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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