Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E12
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 76 3e-14
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 73 2e-13
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 66 2e-11
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 66 2e-11
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 65 5e-11
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 63 2e-10
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 62 4e-10
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 44 8e-05
SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) 38 0.009
SB_36784| Best HMM Match : Rho_N (HMM E-Value=0.0017) 31 1.1
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 30 1.4
SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017) 30 1.4
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_55028| Best HMM Match : Dynamitin (HMM E-Value=0.66) 29 2.5
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 29 3.3
SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) 28 7.5
SB_75| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_54295| Best HMM Match : RVP (HMM E-Value=0.037) 28 7.5
SB_26250| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_57440| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 75.8 bits (178), Expect = 3e-14
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 293 DKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGCT 469
D DKFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 470 AESVESRLSSDGVLSVIAPRKVPPAVEGERKIP 568
S+ +R++ DG+L V A +K PPA E K P
Sbjct: 61 ESSISTRIAEDGMLHVEALKKSPPATT-ENKAP 92
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 293 DKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYIS-RQFTRRYALPEGCT 469
D KF + LDV F PEE+ VK + V + ++ ++HG+ + RQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRAR--QECEEHGFFTARQFNRHFVLPREVD 153
Query: 470 AESVESRLSSDGVLSVIAPRK 532
+++ RL DGVL + A ++
Sbjct: 154 MDTLVPRLGKDGVLYIEADKR 174
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +2
Query: 272 LGSSIKSDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRY 448
L ++ + + DK ++ LDV+++ PEEIS+K G I ++GKH + + +HGY + +F R Y
Sbjct: 29 LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKH-KSEGEHGYETSEFHRSY 87
Query: 449 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVE 550
LP+G +V SR++ DG+L + A + P E
Sbjct: 88 NLPDGVDVSTVSSRITGDGLLHIEALKAEPQETE 121
Score = 28.3 bits (60), Expect(2) = 0.063
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 440 RRYALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
R + LP+ +S+ SRL DG L + A R + P ER++ I
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILHPTPH-ERQVNI 203
Score = 25.4 bits (53), Expect(2) = 0.063
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 251 LAAAARDLGSSIKSDKDKFQVNLDVQHFAPE 343
+ A+ G K D +F V LDV F+P+
Sbjct: 125 VGASTGSAGDIAKIDDKRFTVTLDVSSFSPD 155
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +2
Query: 290 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGC 466
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHV-NEGPFGFELKEFRRTFALPEGV 60
Query: 467 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 562
A +V++R+S+ G L + A + +P GE +
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +2
Query: 269 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRY 448
D G DKF + +DV F P+ I V+ ++V H + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 449 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
LP +S+ +RL +G L A ++ PA+ R++ +
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +2
Query: 290 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGC 466
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHV-NEGPFGFELKEFRRTFALPEGV 60
Query: 467 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 562
A +V++R+S+ G L + A + +P GE +
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +2
Query: 269 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRY 448
D G DKF + +DV F P+ I V+ ++V H + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 449 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
LP +S+ +RL +G L A ++ PA+ R++ +
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/92 (33%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +2
Query: 290 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGC 466
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHV-NEGPFGFELKEFRRTFTLPEGV 60
Query: 467 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 562
A +V++R+S+ G L + A + +P GE +
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +2
Query: 299 DKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGCTAE 475
D+ ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG A
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRHV-NEGPFGFELKEFRRTFTLPEGVEAS 297
Query: 476 SVESRLSSDGVLSVIAPRKVPPAVEGERK 562
+V++R+S+ G L + A + +P GE +
Sbjct: 298 NVKTRISNHGQLHIEAMKALPGPDGGEEE 326
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +2
Query: 269 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRY 448
D G DKF + +DV F P+ I V+ ++V H + + H Y + F R++
Sbjct: 321 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 379
Query: 449 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
LP +S+ +RL +G L A ++ PA+ R++ +
Sbjct: 380 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 420
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +2
Query: 269 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRY 448
D G DKF + +DV F P+ I V+ ++V H + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 449 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
LP +S+ +RL +G L A ++ PA+ R++ +
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKL 186
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/92 (33%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +2
Query: 290 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGC 466
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHV-NEGPFGFELKEFRRTFTLPEGV 60
Query: 467 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 562
A +V++R+S+ G L + A + +P GE +
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +2
Query: 269 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRY 448
D G DKF + +DV F P+ I V+ ++V H + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 449 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
LP +S+ +RL +G L A ++ PA+ R++ +
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +2
Query: 317 LDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGCTAESVESRLS 496
LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LPEG E+V SR+S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRHV-NEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 497 SDGVLSVIAPRKVPPAVEGE 556
+ G L + A RK P E E
Sbjct: 71 NHGHLHIEA-RKALPKPEAE 89
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = +2
Query: 287 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGC 466
K+ +DKF + +DV F PE I V+ ++V H + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150
Query: 467 TAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
+S+ +RL +G L A + V PA+ R++ +
Sbjct: 151 DMDSLTTRLDKEGKLHFEAKKSVAPALPPVRELMV 185
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 290 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPEGC 466
++++K ++ LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LPEG
Sbjct: 3 NNENKLEIAKLDVREYRPEEISFKVENGVVKVQGRHV-NEGPFGFELKEFRRTFTLPEGV 61
Query: 467 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 562
A +V++R+S+ G L + A K P +G +K
Sbjct: 62 EASNVKTRISNHGQLHIEA-MKALPEPDGAKK 92
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/99 (29%), Positives = 52/99 (52%)
Frame = +2
Query: 275 GSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYISRQFTRRYAL 454
G+ +S DKF + +DV+ F PE I V+ ++V H + + H Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 455 PEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 571
P +S+ +RL +G L A ++ PA+ R++ +
Sbjct: 148 PREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 260 AARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYI-SRQF 436
A ++ S+ D KF + LDV F PEE+ VK + V + ++ ++HG+ +RQF
Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRAR--QECEEHGFFTARQF 70
Query: 437 TRRYALPE 460
R + LP+
Sbjct: 71 NRHFVLPQ 78
>SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06)
Length = 237
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/83 (22%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 287 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEKKDQHGYIS-RQFTRRYALPEG 463
++DK+ ++ ++V+ FA +++S++ ++++G+ +K D G+ RQF R P+
Sbjct: 94 QNDKNGIKLEMNVRGFAAKDVSLQVDGQDLIIKGEKMDKDD--GWCKMRQFCWRRRFPKS 151
Query: 464 CTAESVESRLSSDGVLSVIAPRK 532
+S+++ L +L + A ++
Sbjct: 152 TDMKSIKATLKYGDILEIEAQKE 174
>SB_36784| Best HMM Match : Rho_N (HMM E-Value=0.0017)
Length = 456
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +2
Query: 191 FSVLQPAPLLSREYYRPWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTAD 367
F +L+P+ + RP +H A A D SIKS+ DKF V + PE I KT D
Sbjct: 82 FPILKPSQPTRNSHVRPLKHFANRAVD---SIKSELDKFAD--WVLSYVPEPIK-KTVD 134
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 353 VKTADGYIVVEGKHXEKKDQHGYISRQFTRRYALPE 460
+++A GY+V G H K + G + + R LP+
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 620 RRWIGPSPPCARVRFGRSESCVHPPL--LAAPSWVRLQTTHHLKTAG 486
+ W P P V FG + C+H P+ L A W+ QTT KT G
Sbjct: 134 KSWSQPFP----VNFGVRQGCIHSPILFLVAIDWIMRQTTSD-KTRG 175
>SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017)
Length = 1064
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 191 FSVLQPAPLLSREYYRPWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTAD 367
F +L+P+ + RP +H A A D SIKS+ DKF V + PE + KT D
Sbjct: 82 FPILKPSQPTRNSHVRPLKHFANRAVD---SIKSELDKFAD--WVLSYVPEPVK-KTVD 134
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 521 APRKVPPAVEGERKIPIAQTGP 586
+PR V P V ER+I ++Q+GP
Sbjct: 1384 SPRSVKPVVRSERRIKLSQSGP 1405
>SB_55028| Best HMM Match : Dynamitin (HMM E-Value=0.66)
Length = 1709
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 179 LRKIFSVLQPAPLLSREYYRPWRHLAAAARDLGSSI---KSDKDKFQVNLDVQHFAPEEI 349
LR ++S P P +++ + W+HL++ ++ L SI +D K ++N ++ A + I
Sbjct: 343 LRLLYSHGHPVPYQTQDVHDQWQHLSSLSKLLEISIGPEMTDYSKRRLNAQLKFLASDGI 402
Query: 350 SVK 358
+ +
Sbjct: 403 AAR 405
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 389 KHXEKKDQHGYISRQFTRRYAL 454
KH E++D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043)
Length = 811
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 461 GCTAESVESRLSSDGVLSVIAPRKVPPA 544
G + +S+ES++ SDG ++P K PA
Sbjct: 531 GSSPQSLESQVLSDGCTKTMSPNKTSPA 558
>SB_75| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 578 FGRSESCVHPPLLAAPSWVRLQTTHHLKTAGT 483
F R+ V+PP LA P W+ + H T GT
Sbjct: 31 FTRTIGKVYPPTLANPDWIHYE-EHFKTTTGT 61
>SB_54295| Best HMM Match : RVP (HMM E-Value=0.037)
Length = 239
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 533 VPPAVEGERKIPIAQTGPVRKEVKD-QSNG 619
V P + RK+PI+ GPV++++ + + NG
Sbjct: 156 VTPVIHPPRKLPISPLGPVKEKLSEMEQNG 185
>SB_26250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = -3
Query: 535 HLPGCDYRQHTI*RQPGLHRFSRTALRQSVATSELTRYVTMLIFLLXVFAFN 380
H YR H + R+P H +R + + + +T L++ ++AFN
Sbjct: 204 HFERVPYRNHQVLREPARH-VTRFIALSYIGNPQKKKILTELLYFQYMYAFN 254
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 281 SIKSDKDKFQVNLDVQHFAPEEISVKTADGYI----VVEGKHXE-KKDQHGYISRQFTRR 445
+I S +DK + + HFA E+ V+ YI ++E + +K Q +QF +
Sbjct: 1368 AIDSVRDKGEQLISCGHFAASEVEVRIEALYIQWEELLEASATKGRKLQEARDHQQFNQE 1427
Query: 446 YALPEGCTAESVESRLSSD 502
+ + C + LSSD
Sbjct: 1428 VDIADSCITDKETIVLSSD 1446
>SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 232 LPPVASPCCRGSRPWLQHQK 291
L P SPCC+ + W+Q+ K
Sbjct: 296 LKPTMSPCCKTTTTWVQNLK 315
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +2
Query: 386 GKHXEKKDQHGYISRQFTRRYALPEGCTAESVESRLSS-DGVLSVIAPRKVPPAVEGERK 562
G K GY + ALP GCT ES S+ + S AP + P+ + +
Sbjct: 178 GFRTPPKKNPGYCPMYSLFKAALPAGCTGESTPSQQAPYQSTPSQRAPYQSTPSQQAPYQ 237
Query: 563 IPIAQTGPVRKEVKDQS 613
+Q P + Q+
Sbjct: 238 STPSQQAPYQSTPSQQA 254
>SB_57440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 105 IPWLFDYEIERPRSPHGSTFRLG 173
IPW+ DY I R S HG+ +G
Sbjct: 227 IPWVLDYGITRSCSYHGAAAAVG 249
>SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 524 VRLQTTHHLKTAGTPQIQPYSP 459
VR +T HH K P I+PY P
Sbjct: 29 VRERTGHHKKCGALPSIKPYLP 50
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,412,037
Number of Sequences: 59808
Number of extensions: 460251
Number of successful extensions: 1297
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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