Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E11
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-2|CAA84735.2|  335|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF098995-13|AAC67476.2|   95|Caenorhabditis elegans Hypothetical...    27   8.7  

>Z35663-2|CAA84735.2|  335|Caenorhabditis elegans Hypothetical
           protein T04A8.2 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = +2

Query: 332 MFHTKPLMSFKVNLHLLNYSMLCTVRKLLPILNXENXMXKVIQXNRLXRSH*SPRKPLFV 511
           MF+ +PL+ FK+ + +L++S  C  + L+ IL   N M  VI   R  +    P K L +
Sbjct: 103 MFY-EPLIGFKIMMIVLHHSRAC--KSLIQILLVVNRMSCVIYPIRYGKMWMRPLKYLII 159


>AF098995-13|AAC67476.2|   95|Caenorhabditis elegans Hypothetical
           protein F58E1.13 protein.
          Length = 95

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +1

Query: 67  LLINNFCKRNISVTATXEGKRNFXKFVIPNKRGSVLHKKKQMTEDREFEI 216
           +L+ N+   N  +  T +G + F KFV  N+    ++ K+ ++E  EF+I
Sbjct: 11  VLVINYITHNNELIYTPQGLK-FSKFVANNQNKVDIYIKETVSEKPEFDI 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,218,286
Number of Sequences: 27780
Number of extensions: 192984
Number of successful extensions: 383
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)