Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E11
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.84 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.84 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 91  FYRNYLLKVGILDIFG 44
           FY+NYLL V  +D  G
Sbjct: 370 FYKNYLLNVSFIDAAG 385


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 91  FYRNYLLKVGILDIFG 44
           FY+NYLL V  +D  G
Sbjct: 460 FYKNYLLNVSFIDAAG 475


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 183 FFVKYRTSLVWYHKFXK-IP-FTFXSRCYRNVSFTEIIY*KLVS 58
           FF  Y+T L +YHK+ + +P +T     +  VS   +   KL++
Sbjct: 417 FFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLIT 460


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 183 FFVKYRTSLVWYHKFXK-IP-FTFXSRCYRNVSFTEIIY*KLVS 58
           FF  Y+T L +YHK+ + +P +T     +  VS   +   KL++
Sbjct: 417 FFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLIT 460


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 183 FFVKYRTSLVWYHKFXK-IP-FTFXSRCYRNVSFTEIIY*KLVS 58
           FF  Y+T L +YHK+ + +P +T     +  VS   +   KL++
Sbjct: 43  FFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLIT 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,363
Number of Sequences: 438
Number of extensions: 2483
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)