Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E10
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    46   3e-05
AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical ...    41   9e-04
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    30   1.2  
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC084158-24|AAM15622.1|  245|Caenorhabditis elegans Hypothetical...    28   5.0  
Z81509-1|CAB04154.1|  332|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF077530-1|AAC26266.1|  441|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
            protein R11E3.3 protein.
          Length = 931

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 4/170 (2%)
 Frame = -3

Query: 649  ISVNSHVKFLGLILDSKLNGIQHCNYITNKCLSNMNILRSLAGVWWGAHPFNLKLLYNAI 470
            I V +  K LG+ L++      H         +   +++S+AG  WG     +     A+
Sbjct: 630  IPVINAPKLLGITLNTMTGTKDHVGNAIKSMQNKTRVIKSMAGTSWGNDRETMLYTTQAL 689

Query: 469  VRSVLDYG----TFLLQPGDVNAFKKLDSIQSKALRIITGAMKSSPVTALQVECVDPPLH 302
            ++    YG    T LL   D N  +KL+     ALR   G  K +P   +  EC   PL 
Sbjct: 690  IKPTALYGAPAWTSLL--SDTN-LEKLEIAYRSALRACVGLTKDTPTDHIYQECRVLPLK 746

Query: 301  LRRQYLSDKFVFKSLQIQNNHIITKLKTXNELIESSSFWKHKRLPCLIIS 152
               +  + +    +++  N H    LK   +L  +S   K  R+P L +S
Sbjct: 747  EEYKLATQQMYLAAIK-SNTHPCRDLKAKGQLERTS---KPPRIPPLKLS 792


>AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical
           protein Y56A3A.9 protein.
          Length = 373

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
 Frame = -3

Query: 649 ISVNSHVKFLGLILDSKLNGIQHCNYITNKCLSNMNILRSLAGVWWGAHPFNLKLLYNAI 470
           I   +  + LGL  DS L   +H   I  +  S +N ++ LAG  WG++   +   + AI
Sbjct: 65  IPTTNECRLLGLHFDSMLCMREHHAQIKKRLQSQLNQMKGLAGTTWGSNKELMLTTFKAI 124

Query: 469 VRSVLDYG----TFLLQPGDVNAFKKLDSIQSKALRIITGAMKSSPVTALQVECVDPPLH 302
            +    Y     + L++P  +++   LDS     LR+  G  K +P   +  E    PL 
Sbjct: 125 TKPGATYACQSWSQLVKPTRMDS---LDSSYRAILRVCCGLTKDTPGYHIHDEAGILPLS 181

Query: 301 LRRQYLSDKFVFKSLQ 254
            + + ++ ++    ++
Sbjct: 182 HKIKLMNQQYAISMIK 197


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/90 (24%), Positives = 43/90 (47%)
 Frame = -3

Query: 622 LGLILDSKLNGIQHCNYITNKCLSNMNILRSLAGVWWGAHPFNLKLLYNAIVRSVLDYGT 443
           LG ++  KL+  +H     N  L+    L ++   +  ++   + LLY   +R  L+YGT
Sbjct: 150 LGFLISEKLDFSEHWKKSIN--LAKFQ-LANIFNQYSTSNKKLMILLYKTFIRPRLEYGT 206

Query: 442 FLLQPGDVNAFKKLDSIQSKALRIITGAMK 353
            +  P   +  K ++S+Q+   R +   +K
Sbjct: 207 VVSSPTKKSDEKAIESVQNAFTRRLYSRIK 236


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = -3

Query: 622 LGLILDSKLNGIQHCNYITNKCLSNMNI-LRSLAGVWWGAHPFNLKLLYNAIVRSVLDYG 446
           LG ++  KL+   H      KC++     L ++   +  ++   + LLY   +R  L+YG
Sbjct: 180 LGFLISEKLDFSDHWR----KCINLAKFQLANMFNKYSTSNKKLMILLYKTFIRPRLEYG 235

Query: 445 TFLLQPGDVNAFKKLDSIQSKALR 374
           T +  P   +  K ++S+Q+   R
Sbjct: 236 TVVSSPTKKSDEKTIESVQNAFTR 259


>AC084158-24|AAM15622.1|  245|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.6 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -3

Query: 478 NAIVRSVLDYGTFLLQPGDVNAFKKLDSIQSKALRIITGAMKSSPVTALQVECVD 314
           N+ +RS++DY    +     NA+  L  +Q   L+ I    ++ P TA Q   +D
Sbjct: 105 NSKIRSIMDYSNIQMVIAQSNAYDLLGHLQPDILKFIKQHNETFP-TAQQQRMID 158


>Z81509-1|CAB04154.1|  332|Caenorhabditis elegans Hypothetical
           protein F21A3.1 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 208 LIESSSFWKHKRLPCLIISYRKYLXIQTPTHHS 110
           L    S WKH R P LI++Y   +    PT+ S
Sbjct: 125 LYAKQSCWKHLRRPWLILNYTICVVYMIPTYLS 157


>AF077530-1|AAC26266.1|  441|Caenorhabditis elegans Hypothetical
           protein C40D2.3 protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -3

Query: 409 KKLDSIQSK-ALRIITGAMKSSPVTALQVECVDPPLHLRRQYLSDKFVFKSLQIQNNHII 233
           KK  S+Q K  ++++  + K    T ++ E  +P  H   +++S + + +   + N+ I+
Sbjct: 61  KKKWSLQVKFTMKLVAVSGKFFQRT-VKNEFQNPEGHGMDKFISWENMLRDY-VNNDSIV 118

Query: 232 TKLKTXNELIESSSFWKHKRLPC 164
            ++    +++ SS F+KHK  PC
Sbjct: 119 IEINA--DIVSSSGFFKHKYSPC 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,399,676
Number of Sequences: 27780
Number of extensions: 284261
Number of successful extensions: 603
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)