Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E09
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.2  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DKYWECLDSQ 255
           D+YWEC++ Q
Sbjct: 43  DRYWECVNGQ 52


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 415 FYGFITLFLHFFFKYIEISFSIKM 344
           +Y FI L   ++F Y  I F++ +
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHL 127


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 199 ALYQERTSLXT*IEIKT*TKLAIGFVYS 116
           ++Y+ER S+ + +   T T LA+G  Y+
Sbjct: 203 SIYEERISVVSGLHEATLTDLALGENYT 230


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 360 EISMYLKKKCKK 395
           EI MY+++KC++
Sbjct: 231 EIDMYMRRKCQE 242


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 95  KHLNKYLGIYETYR*LCLSF 154
           KH+  +LG+   YR  C  +
Sbjct: 533 KHVRAFLGLCNFYRKFCARY 552


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 226 DKYWECLDSQ 255
           DKY+EC D Q
Sbjct: 53  DKYYECNDGQ 62


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 291 YEL*RKYLKSPALPNGLRILIENEISMYLKKKCKKRVM 404
           YEL    ++SP  P  LR+L    + + +    K   +
Sbjct: 353 YELNMVEVRSPVTPADLRLLTRGRLVLTVSSVSKPEAL 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,764
Number of Sequences: 336
Number of extensions: 2184
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)