Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E09
(497 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open readi... 49 8e-06
BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein. 49 8e-06
AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein. 49 8e-06
AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein. 49 8e-06
AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein. 48 1e-05
BC029486-1|AAH29486.1| 207|Homo sapiens TM2 domain containing 1... 31 1.7
AF353990-1|AAK35064.1| 207|Homo sapiens beta-amyloid binding pr... 31 1.7
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 30 3.9
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 30 3.9
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 30 3.9
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 30 3.9
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 30 3.9
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 30 3.9
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 30 3.9
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 30 3.9
>BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open reading
frame 31 protein.
Length = 125
Score = 49.2 bits (112), Expect = 8e-06
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 163 FTXIRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQ 276
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ
Sbjct: 42 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ 78
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 293 RTLAKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 409
+ L FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 80 KKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 118
>BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein.
Length = 106
Score = 49.2 bits (112), Expect = 8e-06
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 163 FTXIRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQ 276
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ
Sbjct: 23 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ 59
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 293 RTLAKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 409
+ L FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 61 KKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 99
>AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein.
Length = 125
Score = 49.2 bits (112), Expect = 8e-06
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 163 FTXIRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQ 276
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ
Sbjct: 42 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ 78
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 293 RTLAKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 409
+ L FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 80 KKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 118
>AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein.
Length = 155
Score = 49.2 bits (112), Expect = 8e-06
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 163 FTXIRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQ 276
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ
Sbjct: 72 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ 108
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 293 RTLAKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 409
+ L FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 110 KKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 148
>AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein.
Length = 79
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 293 RTLAKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 409
+ L FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 34 KKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 72
Score = 46.8 bits (106), Expect = 4e-05
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = +1
Query: 178 MSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQ 276
M+ P ++R+ CW ARD+YW+CLD +N++D+SQ
Sbjct: 1 MAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ 32
>BC029486-1|AAH29486.1| 207|Homo sapiens TM2 domain containing 1
protein.
Length = 207
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 196 EQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFSENI 312
E+ KC D + + C D + I D++Q+P+ CTN++ ++
Sbjct: 43 EESLKCEDLKVGQYICKDPK-INDATQEPVNCTNYTAHV 80
>AF353990-1|AAK35064.1| 207|Homo sapiens beta-amyloid binding
protein precursor protein.
Length = 207
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 196 EQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFSENI 312
E+ KC D + + C D + I D++Q+P+ CTN++ ++
Sbjct: 43 EESLKCEDLKVGQYICKDPK-INDATQEPVNCTNYTAHV 80
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 30.3 bits (65), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KIFEKSCPTQWVTHFDRKRDFNVFKEKM 388
++++ CPT WVT +D +R F K+
Sbjct: 59 RVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,279,316
Number of Sequences: 237096
Number of extensions: 1124330
Number of successful extensions: 1715
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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