Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E09
         (497 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL050231-3|CAB65851.1|  674|Drosophila melanogaster EG:BACR37P7....    61   7e-10
AE013599-837|AAM68823.2| 1407|Drosophila melanogaster CG2049-PC,...    28   8.1  
AE013599-836|AAF58958.2| 1190|Drosophila melanogaster CG2049-PB,...    28   8.1  

>AL050231-3|CAB65851.1|  674|Drosophila melanogaster
           EG:BACR37P7.3,FBgn0000316;cin protein.
          Length = 674

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +2

Query: 293 RTLAKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEPIKDSQ*IC 433
           ++L K FE+SCP QWV HFDRKR ++ FKEKM  +GY+P++D    C
Sbjct: 43  QSLRKSFEQSCPGQWVKHFDRKRTYDQFKEKM-AQGYDPLEDLSDTC 88



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +1

Query: 178 MSFPDKEQRKKCWDARDKYWECLDSQNIKDSS 273
           MSFPDK +RKKCW+ RD+YW+CL+    K SS
Sbjct: 1   MSFPDKAERKKCWNNRDEYWKCLEEHAPKHSS 32


>AE013599-837|AAM68823.2| 1407|Drosophila melanogaster CG2049-PC,
           isoform C protein.
          Length = 1407

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 252 SEYQGQFTETISLYEL*RKYLKSPALPNGLRILIENEISMYLKKKCKKRV 401
           S YQG++ +   LYEL  KY  +  LP     +   EI   ++++ +K +
Sbjct: 4   SYYQGEYIKHPVLYELSHKYGFTENLPESCMSIRLEEIKEAIRREIRKEL 53


>AE013599-836|AAF58958.2| 1190|Drosophila melanogaster CG2049-PB,
           isoform B protein.
          Length = 1190

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 252 SEYQGQFTETISLYEL*RKYLKSPALPNGLRILIENEISMYLKKKCKKRV 401
           S YQG++ +   LYEL  KY  +  LP     +   EI   ++++ +K +
Sbjct: 4   SYYQGEYIKHPVLYELSHKYGFTENLPESCMSIRLEEIKEAIRREIRKEL 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,511,952
Number of Sequences: 53049
Number of extensions: 330280
Number of successful extensions: 573
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)