Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E08
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 202 3e-52
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 200 1e-51
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 193 1e-49
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 188 3e-48
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 184 4e-47
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 165 2e-41
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 138 5e-33
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 85 6e-17
06_03_1237 + 28602250-28604196 29 3.2
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 29 4.3
02_05_0552 - 29911280-29912541,29912633-29912762 28 7.5
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 27 9.9
06_01_0929 - 7171395-7171676,7172019-7172219,7172438-7172524,717... 27 9.9
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 202 bits (492), Expect = 3e-52
Identities = 104/185 (56%), Positives = 132/185 (71%), Gaps = 4/185 (2%)
Frame = +3
Query: 111 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYXNVVX 284
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 285 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASN 458
ARR+SWR+ISSIEQK E G+E + + KEYR K++ EL IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 459 PXSKVFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEISKAKMQPTHPIRLGLA 638
P SKVFYLKMKGDYYRYLA TG +++ AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399
Query: 639 LNFSV 653
LNFSV
Sbjct: 400 LNFSV 404
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 200 bits (487), Expect = 1e-51
Identities = 102/185 (55%), Positives = 133/185 (71%), Gaps = 4/185 (2%)
Frame = +3
Query: 111 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYXNVVX 284
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 285 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASN 458
ARR+SWR+ISSIEQK E G+E + + K+YR K++ EL IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 459 PXSKVFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEISKAKMQPTHPIRLGLA 638
P SKVFYLKMKGDYYRYLA TG +++ AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181
Query: 639 LNFSV 653
LNFSV
Sbjct: 182 LNFSV 186
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 193 bits (470), Expect = 1e-49
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 4/180 (2%)
Frame = +3
Query: 126 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYXNVVXARRSS 299
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+ ARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 300 WRVISSIEQKTEG--SERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASNPXSKV 473
WR++SSIEQK EG +E + KEYR K++ EL IC +L LLD HL+P ++ SKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 474 FYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEISKAKMQPTHPIRLGLALNFSV 653
FYLKMKGDY+RYLA TG + + AY+ A +I+ A + PTHPIRLGLALNFSV
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSV 180
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 188 bits (459), Expect = 3e-48
Identities = 100/184 (54%), Positives = 126/184 (68%), Gaps = 4/184 (2%)
Frame = +3
Query: 114 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYXNVVXA 287
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+ A
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 288 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASNP 461
RR+SWR+ISSIEQK E G+E KEYR +++ EL IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 462 XSKVFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEISKAKMQPTHPIRLGLAL 641
SKVFYLKMKGDY+RYLA +G +++ AY+ A +I+ A + THPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181
Query: 642 NFSV 653
NFSV
Sbjct: 182 NFSV 185
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 184 bits (449), Expect = 4e-47
Identities = 97/181 (53%), Positives = 123/181 (67%), Gaps = 7/181 (3%)
Frame = +3
Query: 132 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYXNVVXARRS 296
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAY NV+ ARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 297 SWRVISSIEQKTEG--SERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASNPXSK 470
SWR++SSIEQK EG + A+ YR +V+ EL IC +L LLD+ L+P A+ +K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 471 VFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEISKAKMQPTHPIRLGLALNFS 650
VFYLKMKGDY+RYLA TG + AYQ A +I+ ++ PTHPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
Query: 651 V 653
V
Sbjct: 190 V 190
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 165 bits (402), Expect = 2e-41
Identities = 83/146 (56%), Positives = 101/146 (69%), Gaps = 2/146 (1%)
Frame = +3
Query: 222 GVELSNEERNLLSVAYXNVVXARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVQKEL 395
G EL+ EERNLLSVAY NV+ ARR+SWR+ISSIEQK EG A + YR K++ EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 396 XXICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQ 575
IC +L LLD HL+P A SKVFYLKMKGDY+RYLA +G+ + + AY+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137
Query: 576 DAFEISKAKMQPTHPIRLGLALNFSV 653
A +I+ A + PTHPIRLGLALNFSV
Sbjct: 138 AAQDIALADLAPTHPIRLGLALNFSV 163
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 138 bits (333), Expect = 5e-33
Identities = 65/149 (43%), Positives = 94/149 (63%)
Frame = +3
Query: 129 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSSWRV 308
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV + + ARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 309 ISSIEQKTEGSERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASNPXSKVFYLKM 488
+ S+EQK ++ Y+ KV+ EL +C +VL ++ H +P A++ + VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 489 KGDYYRYLAXVATGETXHSVVQDSXKAYQ 575
KGDYYRYLA +TG + S AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 84.6 bits (200), Expect = 6e-17
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Frame = +3
Query: 189 MAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSSWRVISSIE--QKTEGSERKQQMA 362
M AM V + L+ EERNLLSV Y N++ A+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 363 KEYRVKVQKELXXICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAXVATGETXH 542
EYR KV+ E+ IC DV+ ++DK KGDYYRYLA TG
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102
Query: 543 SVVQDSXKAYQ 575
V + S AY+
Sbjct: 103 EVSELSLNAYE 113
>06_03_1237 + 28602250-28604196
Length = 648
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +3
Query: 420 GLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEISKA 599
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 600 KMQPTHPIRLGL 635
++P H +G+
Sbjct: 371 NVEPNHVTFIGV 382
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 126 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYXNVVXA 287
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 288 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 380
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 57 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 203
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 27.5 bits (58), Expect = 9.9
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 237 NEERNLLSVAYXNVVXARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVQKELXXICYD 413
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ + K L
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 414 VLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAXV-ATG 530
L ++D L+ + SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
>06_01_0929 -
7171395-7171676,7172019-7172219,7172438-7172524,
7172973-7173023,7173883-7173987,7174074-7174185,
7174284-7174366,7174434-7174557,7174822-7174973
Length = 398
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 240 EERNLLSVAYXNVVXARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVQ 386
+ERN + +Y N +RSS R + K E + KE +VK Q
Sbjct: 311 KERNEIHASYTNNSPLKRSSSRSKAKSPSKFSKGEEENSQRKEKKVKDQ 359
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,203,350
Number of Sequences: 37544
Number of extensions: 332055
Number of successful extensions: 872
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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