Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E08
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 2e-47
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 184 7e-47
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 4e-37
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 137 6e-33
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 30 1.4
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 7.6
SB_10602| Best HMM Match : RVT_1 (HMM E-Value=1.3e-10) 28 7.6
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 185 bits (451), Expect = 2e-47
Identities = 97/157 (61%), Positives = 111/157 (70%), Gaps = 2/157 (1%)
Frame = +3
Query: 189 MAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSSWRVISSIEQKTEGSERKQQMAKE 368
MA AMKE TE L EERNLLSVAY NVV A+RSSWRVISSIEQK EGSERK+Q +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60
Query: 369 YRVKVQKELXXICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAXVATGETXHSV 548
YR ++ EL +C VL LL+ LIP A + SKVFYLKMKGDYYRY VA + V
Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGADRRREV 120
Query: 549 VQDSXKAYQDAFEISK--AKMQPTHPIRLGLALNFSV 653
VQ + KAY +A EI++ K+ PT PIRLGLALNFSV
Sbjct: 121 VQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSV 157
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/40 (52%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
Frame = +3
Query: 543 SVVQDSXKAYQDAFEISKA---KMQPTHPIRLGLALNFSV 653
+VV+ + +AY++A E ++ K+ PT PIRLGLALNFSV
Sbjct: 207 TVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSV 246
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 184 bits (447), Expect = 7e-47
Identities = 96/185 (51%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Frame = +3
Query: 108 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXA 287
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAY NVV A
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 288 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKAS---N 458
RRSSWRVISS+EQK E + K+YR + EL C +VL +L+ +L+ N
Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120
Query: 459 PXSKVFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEISKAKMQPTHPIRLGLA 638
+KVFYLKM+GDY+RYL VA G++ ++ S +AY+DA ++ P+HPIRLGLA
Sbjct: 121 TEAKVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDA-SAKAEELSPSHPIRLGLA 179
Query: 639 LNFSV 653
LNFSV
Sbjct: 180 LNFSV 184
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 151 bits (367), Expect = 4e-37
Identities = 76/138 (55%), Positives = 101/138 (73%)
Frame = +3
Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSS 299
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+Y N+V RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 300 WRVISSIEQKTEGSERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASNPXSKVFY 479
WRVISSIE+KT S + K+Y+ ++KEL +C +VLG+L++ LIP A + +KVFY
Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197
Query: 480 LKMKGDYYRYLAXVATGE 533
K+KGDYYRYLA + G+
Sbjct: 198 FKLKGDYYRYLAEFSHGQ 215
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 137 bits (332), Expect = 6e-33
Identities = 71/123 (57%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
Frame = +3
Query: 129 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSSWRV 308
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAY NV+ ARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 309 ISSIEQKTE--GSE-RKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASNPXSKVFY 479
I+SIEQK E G + K +M + YR +++EL IC ++L LLD LI + + SKVFY
Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122
Query: 480 LKM 488
K+
Sbjct: 123 NKI 125
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 75.8 bits (178), Expect = 3e-14
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +3
Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSS 299
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV Y NVV ++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 300 WRVISSIEQKTEGSERKQQMAK--EYRVKVQKELXXICYDVL 419
WR + ++ R Q+ +Y+ K++ EL +C ++L
Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 96 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 248
+SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +3
Query: 132 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSSWRVI 311
KE+ AK ++ ER + A K+ E + EE++ L R+ +
Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398
Query: 312 SSIEQKTEGSERKQQMAKEYRVKVQK 389
+ IE+K + E+K+Q +E K ++
Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/121 (19%), Positives = 46/121 (38%)
Frame = +3
Query: 108 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXA 287
P +T V E VQ++ Y+ A+ + V G + R++L ++ +
Sbjct: 1002 PYTTKDVSLLEQVQKSAARFVTSNYNYKASTTEMVESLGWDTLEARRHMLQLSMFFKIKN 1061
Query: 288 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPKASNPXS 467
+SI++ T S R ++ + V +C+ +D+HL S
Sbjct: 1062 NIVKIPFPTSIQENTRTSRRTDISYRQLQANVCDASFSVCHQGKRDVDRHLAGTEHRRAS 1121
Query: 468 K 470
K
Sbjct: 1122 K 1122
>SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 408 YDVLGLLDKHLIPKASNPXSKVFYLKMKGDYY 503
YD ++ HL+P A +++ +K+ DYY
Sbjct: 6 YDSNTVVSHHLLPSAQTRYIRIYPVKVNSDYY 37
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 348 KQQMAKEYRVKVQKELXXICYDVLGLLDKHLIPK 449
K++M ++Y K++KE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_10602| Best HMM Match : RVT_1 (HMM E-Value=1.3e-10)
Length = 416
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 414 VLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAXVATGETXHSVVQDSXKAYQDAFEIS 593
+LGL++ H+ PK+ + ++F +Y+ +L V T ++ + Y + S
Sbjct: 116 ILGLIESHIDPKSFH--HRMFLAACCLEYFGFLRSVEFTVTQEKCIEQNMPLYAVFIDFS 173
Query: 594 KA 599
KA
Sbjct: 174 KA 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,770,588
Number of Sequences: 59808
Number of extensions: 376165
Number of successful extensions: 973
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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