Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E07
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein. 160 4e-39
BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase pro... 160 4e-39
BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase pro... 160 4e-39
AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase pro... 160 4e-39
M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein. 159 9e-39
Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein. 47 6e-05
U53331-1|AAD08634.1| 349|Homo sapiens spermidine aminopropyltra... 47 6e-05
BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein. 47 6e-05
BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein. 47 6e-05
AD001528-1|AAB61308.1| 366|Homo sapiens spermidine aminopropylt... 47 6e-05
>M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 160 bits (388), Expect = 4e-39
Identities = 71/139 (51%), Positives = 96/139 (69%)
Frame = +3
Query: 177 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 356
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 357 XFSYQEMISFLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKR 536
FSYQEMI+ LPLC H NP VLI V REV KHP V+ +V EID+ VI++SK+
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKK 135
Query: 537 YLPFMAVGFXSPKLNSSCG 593
+LP MA+G+ S KL G
Sbjct: 136 FLPGMAIGYSSSKLTLHVG 154
>BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 160 bits (388), Expect = 4e-39
Identities = 71/139 (51%), Positives = 96/139 (69%)
Frame = +3
Query: 177 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 356
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 357 XFSYQEMISFLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKR 536
FSYQEMI+ LPLC H NP VLI V REV KHP V+ +V EID+ VI++SK+
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKK 135
Query: 537 YLPFMAVGFXSPKLNSSCG 593
+LP MA+G+ S KL G
Sbjct: 136 FLPGMAIGYSSSKLTLHVG 154
>BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 160 bits (388), Expect = 4e-39
Identities = 71/139 (51%), Positives = 96/139 (69%)
Frame = +3
Query: 177 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 356
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 357 XFSYQEMISFLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKR 536
FSYQEMI+ LPLC H NP VLI V REV KHP V+ +V EID+ VI++SK+
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKK 135
Query: 537 YLPFMAVGFXSPKLNSSCG 593
+LP MA+G+ S KL G
Sbjct: 136 FLPGMAIGYSSSKLTLHVG 154
>AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 160 bits (388), Expect = 4e-39
Identities = 71/139 (51%), Positives = 96/139 (69%)
Frame = +3
Query: 177 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 356
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 357 XFSYQEMISFLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKR 536
FSYQEMI+ LPLC H NP VLI V REV KHP V+ +V EID+ VI++SK+
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKK 135
Query: 537 YLPFMAVGFXSPKLNSSCG 593
+LP MA+G+ S KL G
Sbjct: 136 FLPGMAIGYSSSKLTLHVG 154
>M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 159 bits (385), Expect = 9e-39
Identities = 70/139 (50%), Positives = 96/139 (69%)
Frame = +3
Query: 177 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 356
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 357 XFSYQEMISFLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKR 536
FSYQEMI+ LPLC H NP VLI V REV KHP V+ +V EID+ VI++SK+
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKK 135
Query: 537 YLPFMAVGFXSPKLNSSCG 593
+LP MA+G+ S K+ G
Sbjct: 136 FLPGMAIGYSSSKVTLHVG 154
>Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein.
Length = 368
Score = 46.8 bits (106), Expect = 6e-05
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 213 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXFSYQEMIS 383
WP G +++ EV++ E S YQNI++ + G +L+L G + D +Y I
Sbjct: 126 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 184
Query: 384 FLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKRYL 542
+ +VLI + E+ K + K + +VEID VI+ K+Y+
Sbjct: 185 GSGKEDYTGK-DVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYM 235
>U53331-1|AAD08634.1| 349|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 349
Score = 46.8 bits (106), Expect = 6e-05
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 213 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXFSYQEMIS 383
WP G +++ EV++ E S YQNI++ + G +L+L G + D +Y I
Sbjct: 107 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 165
Query: 384 FLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKRYL 542
+ +VLI + E+ K + K + +VEID VI+ K+Y+
Sbjct: 166 GSGKEDYTGK-DVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYM 216
>BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 46.8 bits (106), Expect = 6e-05
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 213 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXFSYQEMIS 383
WP G +++ EV++ E S YQNI++ + G +L+L G + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 384 FLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKRYL 542
+ +VLI + E+ K + K + +VEID VI+ K+Y+
Sbjct: 183 GSGKEDYTGK-DVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYM 233
>BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 46.8 bits (106), Expect = 6e-05
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 213 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXFSYQEMIS 383
WP G +++ EV++ E S YQNI++ + G +L+L G + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 384 FLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKRYL 542
+ +VLI + E+ K + K + +VEID VI+ K+Y+
Sbjct: 183 GSGKEDYTGK-DVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYM 233
>AD001528-1|AAB61308.1| 366|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 366
Score = 46.8 bits (106), Expect = 6e-05
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 213 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXFSYQEMIS 383
WP G +++ EV++ E S YQNI++ + G +L+L G + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 384 FLPLCCHKNPXNVLIXXXXXXXVAREVAKHPQVKHIVLVEIDDRVIELSKRYL 542
+ +VLI + E+ K + K + +VEID VI+ K+Y+
Sbjct: 183 GSGKEDYTGK-DVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYM 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,114,156
Number of Sequences: 237096
Number of extensions: 1517908
Number of successful extensions: 2472
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2472
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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