Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_E06
(393 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31; Eukary... 91 5e-18
UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66; Eukary... 87 9e-17
UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal ... 77 1e-13
UniRef50_P90983 Cluster: Ribosomal protein, small subunit protei... 75 6e-13
UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila m... 74 9e-13
UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=... 70 2e-11
UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4; Eukaryo... 69 2e-11
UniRef50_Q1DQB3 Cluster: Predicted protein; n=4; Pezizomycotina|... 66 2e-10
UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal ... 66 2e-10
UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7; Methan... 64 7e-10
UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellul... 62 3e-09
UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5; T... 60 1e-08
UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces cere... 60 1e-08
UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellul... 60 2e-08
UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n... 56 2e-07
UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2; Archae... 56 2e-07
UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11; Therm... 56 3e-07
UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1; Encepha... 53 2e-06
UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1; ... 52 4e-06
UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12; Archa... 50 2e-05
UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lambli... 49 3e-05
UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10; Archa... 45 5e-04
UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8; Euryar... 45 5e-04
UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3; Haloba... 44 0.001
UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;... 36 0.37
UniRef50_A6CEA5 Cluster: Probable deca-heme c-type cytochrome; n... 33 1.5
UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3; ... 33 2.0
UniRef50_UPI0000F211F6 Cluster: PREDICTED: hypothetical protein;... 32 3.4
UniRef50_Q7RRY0 Cluster: Putative uncharacterized protein PY0058... 31 6.0
UniRef50_Q7SEK5 Cluster: Putative uncharacterized protein NCU028... 31 6.0
UniRef50_UPI0000F32986 Cluster: UPI0000F32986 related cluster; n... 31 7.9
>UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31;
Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila
melanogaster (Fruit fly)
Length = 56
Score = 91.5 bits (217), Expect = 5e-18
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
+YGQGSR CR+CSNRHGLIRKYGLNICRQCFREYA+DI F KLD
Sbjct: 13 KYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 56
>UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66;
Eukaryota|Rep: 40S ribosomal protein S29 - Homo sapiens
(Human)
Length = 56
Score = 87.4 bits (207), Expect = 9e-17
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DI F KLD
Sbjct: 13 KFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal
protein S29; n=4; Theria|Rep: PREDICTED: similar to
ribosomal protein S29 - Pan troglodytes
Length = 56
Score = 77.0 bits (181), Expect = 1e-13
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
++GQGSRSCR SNRHG IRKYGLN CRQCF +YA DI F KLD
Sbjct: 13 KFGQGSRSCRVYSNRHGRIRKYGLNKCRQCFHQYAKDIGFIKLD 56
>UniRef50_P90983 Cluster: Ribosomal protein, small subunit protein
29; n=18; Eukaryota|Rep: Ribosomal protein, small
subunit protein 29 - Caenorhabditis elegans
Length = 56
Score = 74.5 bits (175), Expect = 6e-13
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
++G GSRSCR C+ HGLIRKYGL++CR+CFRE A DI F KLD
Sbjct: 13 KFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56
>UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila
melanogaster|Rep: CG8495-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 55
Score = 74.1 bits (174), Expect = 9e-13
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 143 RSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
R+CSNRHGLIRKYGLNICRQCFREYA+DI F KLD
Sbjct: 21 RACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 55
>UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=2;
Fungi/Metazoa group|Rep: 40S ribosomal protein S29,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 86
Score = 69.7 bits (163), Expect = 2e-11
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKL 244
++G+GSR CR C++R GLIRKYG++ICRQCFRE A DI F K+
Sbjct: 13 KFGKGSRECRVCAHRAGLIRKYGMDICRQCFREKAQDIGFYKV 55
>UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4;
Eukaryota|Rep: 40S ribosomal protein S29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 56
Score = 69.3 bits (162), Expect = 2e-11
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
+YG GSR CR C N HGLIRKYGLN CRQCFR A +I F K
Sbjct: 13 KYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54
>UniRef50_Q1DQB3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 123
Score = 66.5 bits (155), Expect = 2e-10
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +2
Query: 119 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
YG+GSR CR C+++ GLIRKYGL +CRQCFRE + DI F K
Sbjct: 14 YGKGSRQCRVCAHKAGLIRKYGLLVCRQCFREKSQDIGFVK 54
>UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal
protein S29; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S29 -
Ornithorhynchus anatinus
Length = 168
Score = 66.1 bits (154), Expect = 2e-10
Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +2
Query: 110 LARYGQGSRSC-RSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
LAR+ R CSNRHGLIRKYGLN+CRQCFR+YA DI F K
Sbjct: 73 LARFSDSFHPLSRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 117
>UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7;
Methanococcales|Rep: 30S ribosomal protein S14P -
Methanococcus jannaschii
Length = 53
Score = 64.5 bits (150), Expect = 7e-10
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +2
Query: 116 RYGQGSRSCRSCSN-RHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
+YG G R C+ C + GLIRKYGLN+CRQCFRE AH + F KLD
Sbjct: 9 KYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD 53
>UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellular
organisms|Rep: 40S ribosomal protein S29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 56
Score = 62.5 bits (145), Expect = 3e-09
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
+YG+GSR C R GLIRKYGLNI RQ FREYA+DI F K
Sbjct: 13 KYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVK 54
>UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5;
Trypanosomatidae|Rep: Ribosomal protein s29, putative -
Leishmania major
Length = 57
Score = 60.5 bits (140), Expect = 1e-08
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +2
Query: 122 GQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKL 244
G+G+R C CSN+ LIRKY LN+CRQCFRE A I F KL
Sbjct: 16 GKGARCCVICSNQKALIRKYELNVCRQCFRENAEHIGFTKL 56
>UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces
cerevisiae YLR388w YS29A ribosomal protein S29; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P41057
Saccharomyces cerevisiae YLR388w YS29A ribosomal protein
S29 - Yarrowia lipolytica (Candida lipolytica)
Length = 78
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +2
Query: 119 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
YG+G R CR +N++ +IRKYGLN+CRQ FRE A DI F K
Sbjct: 36 YGKGGRKCRITNNQNAVIRKYGLNLCRQSFREKAADIGFTK 76
>UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellular
organisms|Rep: 30S ribosomal protein S14P -
Archaeoglobus fulgidus
Length = 51
Score = 59.7 bits (138), Expect = 2e-08
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 119 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
+G+G+ CR C R GLIR YGL +CRQCFRE A ++ F K
Sbjct: 9 FGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKK 49
>UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n=1;
Ostreococcus tauri|Rep: RS29_CULQU 40S ribosomal protein
S29 - Ostreococcus tauri
Length = 157
Score = 56.4 bits (130), Expect = 2e-07
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2
Query: 134 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
R R C N+ +IRKY LNICRQCFREYA DI F K
Sbjct: 120 RRSRVCENQWAIIRKYNLNICRQCFREYAKDIGFQK 155
>UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2;
Archaea|Rep: 30S ribosomal protein S14P - Nanoarchaeum
equitans
Length = 69
Score = 56.4 bits (130), Expect = 2e-07
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
++G+G+R C C G+IR+YGL +C+ CF+E AH++ F K
Sbjct: 25 KFGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFK 66
>UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11;
Thermoprotei|Rep: 30S ribosomal protein S14P -
Sulfolobus acidocaldarius
Length = 54
Score = 55.6 bits (128), Expect = 3e-07
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
R+G+G + C+ C +R +I+KYGL +CRQCFRE A+ + F K
Sbjct: 11 RFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRK 52
>UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S29
- Encephalitozoon cuniculi
Length = 55
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 119 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
+G+GSRSC SC G+IRK L +CR+CFREYA DI F D
Sbjct: 15 FGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIYD 55
>UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 239
Score = 52.0 bits (119), Expect = 4e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2
Query: 119 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKL 244
YG+ S+ CR C R GLI KY + CR+CFRE A I F K+
Sbjct: 13 YGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPHIGFVKV 54
>UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12;
Archaea|Rep: 30S ribosomal protein S14P - Thermoplasma
volcanium
Length = 53
Score = 50.0 bits (114), Expect = 2e-05
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 140 CRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
C C + G++RKYGL++CRQCFRE A + F K
Sbjct: 18 CVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEK 51
>UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_44835_45248 - Giardia lamblia
ATCC 50803
Length = 137
Score = 49.2 bits (112), Expect = 3e-05
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +2
Query: 134 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKL 244
R CR C N + + RKYGL ICR+CF+E A I F KL
Sbjct: 100 RECRICGNYNSVYRKYGLFICRRCFKENAGKIGFVKL 136
>UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10;
Archaea|Rep: 30S ribosomal protein S14P - Pyrococcus
abyssi
Length = 56
Score = 45.2 bits (102), Expect = 5e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
++G+G+R C C +IR +GL +CR CFRE A + F K +
Sbjct: 13 KFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKYE 56
>UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S14P -
Halobacterium salinarium (Halobacterium halobium)
Length = 52
Score = 45.2 bits (102), Expect = 5e-04
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 131 SRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
+ CR C GL+ KY + +CRQCFRE A + F K
Sbjct: 14 THECRRCGREQGLVGKYDIWLCRQCFREIARSMGFKK 50
>UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S14P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 61
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXK 241
R GQ SC+ C GL+ KY + +CRQCFRE + + F K
Sbjct: 19 RTGQ-LESCQRCGREQGLVGKYDIWLCRQCFREISRGMGFRK 59
>UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Clostridium perfringens
Length = 61
Score = 35.5 bits (78), Expect = 0.37
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 140 CRSCSNRHGLIRKYGLNICRQCFREYAH 223
CR C H +++K+G ICR CFRE A+
Sbjct: 24 CRLCGRPHSVLKKFG--ICRICFRELAY 49
>UniRef50_A6CEA5 Cluster: Probable deca-heme c-type cytochrome; n=1;
Planctomyces maris DSM 8797|Rep: Probable deca-heme
c-type cytochrome - Planctomyces maris DSM 8797
Length = 728
Score = 33.5 bits (73), Expect = 1.5
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 92 IFGILTLAR-YGQGSRSCRSCSNRHGLIRKY-GLNICRQCFREYAHDI 229
+FG T ++ Y +G R C C N H L K+ G +C QC E +D+
Sbjct: 294 VFGSFTQSKMYRKGVR-CTDCHNPHSLKLKFTGNKLCTQCHLEARYDV 340
>UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Gloeobacter violaceus
Length = 68
Score = 33.1 bits (72), Expect = 2.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 140 CRSCSNRHGLIRKYGLNICRQCFREYAH 223
C C G IR +GL CR CFRE AH
Sbjct: 31 CWRCGRPRGYIRDFGL--CRICFREMAH 56
>UniRef50_UPI0000F211F6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 446
Score = 32.3 bits (70), Expect = 3.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 2 LSFKFCHLEGVSNLLLVSEKQFNFLKWATQIFGIL 106
+SF C+ G LV E+ N L WA QIFG+L
Sbjct: 253 ISFAVCYRYGP----LVEERSINILSWALQIFGLL 283
>UniRef50_Q7RRY0 Cluster: Putative uncharacterized protein PY00587;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00587 - Plasmodium yoelii yoelii
Length = 547
Score = 31.5 bits (68), Expect = 6.0
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 SFKFCHLEGVSNLLLVSEKQFNF-LKWATQIFGILTLARYGQGSRSCRSCSNRHGLIR 175
+ + CH+ ++N + + K+ NF + W+ +FG+L A Y R + N + I+
Sbjct: 417 ALQLCHISILTNFIFLFYKKNNFSIAWSAHLFGLLGGAIYSYYQRKINNNYNYYPFIQ 474
>UniRef50_Q7SEK5 Cluster: Putative uncharacterized protein
NCU02809.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU02809.1 - Neurospora crassa
Length = 702
Score = 31.5 bits (68), Expect = 6.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 51 LARNNLIS*NGPRKYLVFSPSPDTDKDLGHADPAPT 158
L+ + ++S P +F PSPDTD D + P PT
Sbjct: 437 LSASEILSLTSPYLNALFPPSPDTDGDDSSSSPIPT 472
>UniRef50_UPI0000F32986 Cluster: UPI0000F32986 related cluster; n=1;
Bos taurus|Rep: UPI0000F32986 UniRef100 entry - Bos
Taurus
Length = 54
Score = 31.1 bits (67), Expect = 7.9
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 113 ARYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKL 244
A +G +R CR + + L+ + + +CR+C + +I F L
Sbjct: 10 ALFGSQARGCRKVNTLYLLVPYFSITLCRRCCEQNNKNISFLML 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,319,296
Number of Sequences: 1657284
Number of extensions: 5035479
Number of successful extensions: 12590
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12585
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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