Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E06
         (393 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   2.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   4.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    20   7.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 105 RIPNICVAHFKKLNCFSLTSNK 40
           R PNIC      L  F  T+N+
Sbjct: 319 RTPNICYKLLSNLGIFPKTTNE 340


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 86  TQIFGILTLARYGQGSRSCRSCS 154
           T+IFG L +    +G ++C + S
Sbjct: 22  TKIFGFLPVCSSQKGQKTCLNLS 44


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 108 PSPDTDKDLGHAD 146
           P P+T+KD G  D
Sbjct: 75  PHPETEKDWGDGD 87


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 51  TSNKLDTPSRWQ 16
           T NK D PS W+
Sbjct: 129 TQNKNDDPSYWE 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,839
Number of Sequences: 336
Number of extensions: 1301
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)