Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E06
         (393 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    83   4e-18
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.3  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   1.7  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   1.7  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   1.7  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   1.7  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           23   3.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   7.0  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            22   9.2  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 83.0 bits (196), Expect = 4e-18
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = +2

Query: 116 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIXFXKLD 247
           +YGQGSR  R+CSN HG+IRKYGLNICRQCFREYA DI F KLD
Sbjct: 13  KYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56



 Score = 30.3 bits (65), Expect = 0.026
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +1

Query: 79  MGHANIWYSHPRQ 117
           MG AN+WYSHPR+
Sbjct: 1   MGFANLWYSHPRK 13


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 20  HLEGVSNLLLVSEKQFNFLKWATQIFGILTLARYGQGSRSCRSCSNR 160
           HLE   +  L S+ Q+ F +  + I  I +L   G+ SRS    +NR
Sbjct: 533 HLEDPDSPQL-SDAQYGFRRGRSTISAIQSLVDAGKASRSFGQTNNR 578


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 94  IWY-SHPRQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 207
           IW+ +   ++R      P+LL +A LNP+   E M  ++
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 94  IWY-SHPRQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 207
           IW+ +   ++R      P+LL +A LNP+   E M  ++
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 94  IWY-SHPRQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 207
           IW+ +   ++R      P+LL +A LNP+   E M  ++
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -1

Query: 219 AYSLKHCLHMFKPYLRIKPCLLEQDRHDR-DPCPYLARVRIPNICV 85
           AY++ H   ++       P     +R  R DPC YL     P IC+
Sbjct: 411 AYAIHHDPDIYPEPATYDPDRFTPERMARRDPCAYLPFGEGPRICI 456


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 94  IWY-SHPRQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 207
           IW+ +   ++R      P+LL +A LNP+   E M  ++
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIM 124


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 12/54 (22%), Positives = 22/54 (40%)
 Frame = -1

Query: 165  PCLLEQDRHDRDPCPYLARVRIPNICVAHFKKLNCFSLTSNKLDTPSRWQNLNE 4
            P  +E   H    C     +R+  +       +N  +L    L++P RW ++ E
Sbjct: 954  PGSVESVAHVLFQCEVFHEIRVELLGYGTSDPVNENNLGMKLLESPERWNSIQE 1007


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 84  AHFKKLNCFSLTSNKL 37
           +H+K++ C+SL    L
Sbjct: 174 SHYKRIQCYSLKQRSL 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,516
Number of Sequences: 2352
Number of extensions: 6586
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)