Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_E04
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051860-1|AAK93284.1|  594|Drosophila melanogaster LD35730p pro...    42   5e-04
AE014134-1223|AAN10614.1|  594|Drosophila melanogaster CG11266-P...    42   5e-04
AE014134-1222|AAF52478.1|  594|Drosophila melanogaster CG11266-P...    42   5e-04

>AY051860-1|AAK93284.1|  594|Drosophila melanogaster LD35730p
           protein.
          Length = 594

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 544 RSKSRGLDPKLE-DLPPXERDLRTVFCMQLSQRIRAK 651
           RS   G D     +L P ERD RTVFC+QLSQR+RA+
Sbjct: 215 RSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRAR 251



 Score = 37.1 bits (82), Expect = 0.021
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +1

Query: 130 MAEDFDVEAMLEAPYNKSD 186
           MAEDFDVEAMLEAPY K++
Sbjct: 1   MAEDFDVEAMLEAPYMKNN 19


>AE014134-1223|AAN10614.1|  594|Drosophila melanogaster CG11266-PB,
           isoform B protein.
          Length = 594

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 544 RSKSRGLDPKLE-DLPPXERDLRTVFCMQLSQRIRAK 651
           RS   G D     +L P ERD RTVFC+QLSQR+RA+
Sbjct: 215 RSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRAR 251



 Score = 37.1 bits (82), Expect = 0.021
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +1

Query: 130 MAEDFDVEAMLEAPYNKSD 186
           MAEDFDVEAMLEAPY K++
Sbjct: 1   MAEDFDVEAMLEAPYMKNN 19


>AE014134-1222|AAF52478.1|  594|Drosophila melanogaster CG11266-PA,
           isoform A protein.
          Length = 594

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 544 RSKSRGLDPKLE-DLPPXERDLRTVFCMQLSQRIRAK 651
           RS   G D     +L P ERD RTVFC+QLSQR+RA+
Sbjct: 215 RSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRAR 251



 Score = 37.1 bits (82), Expect = 0.021
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +1

Query: 130 MAEDFDVEAMLEAPYNKSD 186
           MAEDFDVEAMLEAPY K++
Sbjct: 1   MAEDFDVEAMLEAPYMKNN 19


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,239,194
Number of Sequences: 53049
Number of extensions: 248720
Number of successful extensions: 779
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)