Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_D24
(484 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 172 3e-42
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 121 1e-26
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 93 3e-18
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 92 5e-18
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 74 1e-12
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 73 3e-12
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 70 2e-11
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 69 7e-11
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 63 3e-09
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 60 3e-08
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 54 2e-06
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 48 1e-04
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 36 0.48
UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa... 33 2.6
UniRef50_A3LS16 Cluster: Predicted protein; n=2; Saccharomycetac... 33 2.6
UniRef50_A6SNQ0 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 4.5
UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillar... 32 5.9
UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S riboso... 32 7.8
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 172 bits (419), Expect = 3e-42
Identities = 85/115 (73%), Positives = 90/115 (78%)
Frame = +2
Query: 26 PPKKDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPTYEKLYKEV 205
PPKKDAK+SAKQPQKTQ VRDKLNNQVLFDK TYEKLYKEV
Sbjct: 2 PPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEV 61
Query: 206 PQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQVIYTRATKGDD 370
P YKLITP+VVSERLK+RGSL + ALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 62 PAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 121 bits (291), Expect = 1e-26
Identities = 68/119 (57%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +2
Query: 26 PPKKDAKAS-AKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPTYEKLYKE 202
PPK D K A + K VRDKLNN VLFDK TY+KL KE
Sbjct: 2 PPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKE 61
Query: 203 VPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 379
VP YKLITPAVVSERLK+RGSL R AL EL KGLIK V +H QVIYTR TKG D A
Sbjct: 62 VPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 93.1 bits (221), Expect = 3e-18
Identities = 41/74 (55%), Positives = 57/74 (77%)
Frame = +2
Query: 137 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 316
V+DK NN V+ DK Y+++ KEVP YKLI+ +V+ +R+K+ GSL R A+ L ++GLIK+
Sbjct: 32 VKDKANNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIKR 91
Query: 317 VVQHHGQVIYTRAT 358
VV HH Q+IYTRAT
Sbjct: 92 VVHHHAQLIYTRAT 105
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 92.3 bits (219), Expect = 5e-18
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = +2
Query: 140 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQV 319
++K+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSL R A+ +L +GLI+ V
Sbjct: 160 KEKVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMV 219
Query: 320 VQHHGQVIYTRAT 358
H Q IYTRAT
Sbjct: 220 SVHSSQQIYTRAT 232
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 74.1 bits (174), Expect = 1e-12
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 140 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQV 319
+DK N+ V FDK TY+KL ++P+ +LIT + + ++LKV S+ R AL L E+ LIK V
Sbjct: 32 KDKANHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKLIKPV 91
Query: 320 V-QHHGQVIYTRA 355
QHH Q +YT+A
Sbjct: 92 CDQHHAQRLYTKA 104
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 73.3 bits (172), Expect = 3e-12
Identities = 31/77 (40%), Positives = 53/77 (68%)
Frame = +2
Query: 137 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 316
++D+ + V+ D+ Y+++ KEVP Y+ ++ +V+ +RLK+ GSL R AL L ++G+IK
Sbjct: 32 MKDRAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKP 91
Query: 317 VVQHHGQVIYTRATKGD 367
+ +H Q IYTRAT +
Sbjct: 92 ISKHSKQAIYTRATASE 108
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 70.1 bits (164), Expect = 2e-11
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +2
Query: 140 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQV 319
+DK N+ VLFDK T ++ + +V + +L+TPAVV +LKV S R L + KG+IK V
Sbjct: 34 KDKANHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKGIIKPV 93
Query: 320 -VQHHGQVIYTRA 355
Q HGQ+IYT+A
Sbjct: 94 GEQTHGQMIYTKA 106
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 68.5 bits (160), Expect = 7e-11
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 140 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQV 319
R+ L N V+FDK TY+KL EVP+YKLITP+++S+RLK+ S+ L +L + LI+ V
Sbjct: 33 REALQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLV 92
Query: 320 VQHHGQVIYTR 352
+YTR
Sbjct: 93 SCSSKTRVYTR 103
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 316
V++KLNN V+FDK T +K K+VP K+ITP VV++R+ + G+L + L L +K LI
Sbjct: 35 VKEKLNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELIVP 94
Query: 317 V-VQHHGQVIYTRATK 361
V V +H +V ++R+ K
Sbjct: 95 VKVDYHIRV-FSRSDK 109
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 59.7 bits (138), Expect = 3e-08
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +2
Query: 179 TYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQVIYT 349
TY+KL EVP+YK+IT AV+ +RL++ SL R + L+ KGLIK +V H +YT
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIKPLVSHAALNVYT 76
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 54.0 bits (124), Expect = 2e-06
Identities = 37/76 (48%), Positives = 41/76 (53%)
Frame = +2
Query: 143 DKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVV 322
DKLNNQVLFD T RL++RGSL R AL EL KGLIK V
Sbjct: 40 DKLNNQVLFDNAT---------------------RLEIRGSLARAALQELLGKGLIKLVS 78
Query: 323 QHHGQVIYTRATKGDD 370
+H +VIYTR TK D
Sbjct: 79 KHRARVIYTRNTKSGD 94
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 47.6 bits (108), Expect = 1e-04
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 140 RDKLNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 316
+DKLNN V D +Y+++ ++P+ LIT + VS++ KV GSL R + + GL+
Sbjct: 100 KDKLNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSGLLVP 159
Query: 317 V-VQHHGQVIYT 349
Q+ Q I+T
Sbjct: 160 AGDQNSKQYIFT 171
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 35.9 bits (79), Expect = 0.48
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 158 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQ 337
QVL D+ ++ + KEV ++ITP ++ + ++ S+ L L+E+G + V + H
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRT 101
Query: 338 VIYTRATK 361
IY A +
Sbjct: 102 EIYVPAKR 109
>UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0489400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 95
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 143 HELFLWTTSSSWLCRHRILPSXSVFFEAVWP--KPSRPSWAGIV*SWK 6
H LF W++S S+ RHR LP +AVW +PS S + S K
Sbjct: 47 HPLFRWSSSLSFARRHRFLPLVHSLRQAVWSLLRPSLSSTLSVELSGK 94
>UniRef50_A3LS16 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 540
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 288 SMSAXLXREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFL 109
S+S+ + FNL+ G+ ++ G+S +F+ +G+ + W F + P+D FL
Sbjct: 133 SLSSDIIGRRWAFNLTFLITGIFAVVAGSSP-TFAAIGVFDAFWSFGVGGNLPVDSAIFL 191
Query: 108 -ALP 100
ALP
Sbjct: 192 EALP 195
>UniRef50_A6SNQ0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 589
Score = 32.7 bits (71), Expect = 4.5
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 330 WCWTTCLMRPFSLSSMSAXLXREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSN 166
WC TC + F S + ++P T +++ V Y S Y F LSN
Sbjct: 166 WCHETCYRKRFQYKSGRIAMRKDPTTIQVNNLRTHVSRRYVHESRYKFDNWFLSN 220
>UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillardia
theta|Rep: 40S ribosomal protein S25 - Guillardia theta
(Cryptomonas phi)
Length = 87
Score = 32.3 bits (70), Expect = 5.9
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +2
Query: 140 RDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIEL 292
++K NNQ+ +K Y+K+ E+ + K ++ +S + +++ SL + + L
Sbjct: 15 KEKSNNQIYIEKSLYQKIIDELNKEKFVSFTSLSSKYRIKISLIKKIINHL 65
>UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Rattus norvegicus
Length = 93
Score = 31.9 bits (69), Expect = 7.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 287 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 379
EL +GL K V +H QV+ TR TKG D A
Sbjct: 58 ELLSEGLSKLVSKHRAQVVDTRNTKGGDAPA 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,577,567
Number of Sequences: 1657284
Number of extensions: 7725628
Number of successful extensions: 22714
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22704
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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