Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D24
         (484 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   4.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   4.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 247 VKGPRFPXEXSTHRT*GKRSHQTGSPTP 330
           V G ++P   + H+T G  S++   P P
Sbjct: 367 VSGTKYPILKAIHQTLGGSSNEIVEPVP 394


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 393 YIIVYATGSSPLVARV*ITCPWCW 322
           Y+   ATG +  V    I CP  W
Sbjct: 272 YLYYVATGKASFVTVPMIVCPIVW 295


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 393 YIIVYATGSSPLVARV*ITCPWCW 322
           Y+   ATG +  V    I CP  W
Sbjct: 272 YLYYVATGKASFVTVPMIVCPIVW 295


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 182 MWVYQTTPGCSTCHELF 132
           MW    T GC+   ELF
Sbjct: 1   MWSNSLTAGCNPDSELF 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,613
Number of Sequences: 336
Number of extensions: 1892
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)