Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_D24
(484 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein S25|Schizosacc... 74 1e-14
SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein S25|Sc... 72 4e-14
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 28 0.85
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 1.1
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 1.1
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 25 4.5
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 25 4.5
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 25 6.0
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 6.0
>SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 88
Score = 73.7 bits (173), Expect = 1e-14
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +2
Query: 137 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 316
V+DK + +FDK +++ KEVP +K I+ +V+ +R+K+ GSL R A+ +L E+G+I++
Sbjct: 12 VKDKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQK 71
Query: 317 VVQHHGQVIYTRA 355
V QH Q IYTRA
Sbjct: 72 VDQHSKQAIYTRA 84
>SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 89
Score = 72.1 bits (169), Expect = 4e-14
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = +2
Query: 137 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 316
V+DK + +FDK +++ KEVP +K I+ +V+ +R+K+ GSL R A+ +L E+G+I++
Sbjct: 12 VKDKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQK 71
Query: 317 VVQHHGQVIYTR 352
V QH Q IYTR
Sbjct: 72 VDQHSKQAIYTR 83
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 27.9 bits (59), Expect = 0.85
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 185 HMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS 81
+M YQ TP HE WT SS L H + PS
Sbjct: 152 YMRAYQLTPEFMAAHEEKTWTASS--LNSHNLTPS 184
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 27.5 bits (58), Expect = 1.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 66 KKHRXRRKDPVAAKPRRRSGPKEKFVTS*TTRC 164
K HR DP+ P RR GP + V + +C
Sbjct: 203 KVHRPNHFDPLVKLPTRRRGPGRRPVVALAMKC 235
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.5 bits (58), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 192 SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPP 94
SF Y L NN++L +S + ++ F++ PPP
Sbjct: 1008 SFIYGSLQNNSFLSRVSPSSLEENVFYIQHPPP 1040
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 25.4 bits (53), Expect = 4.5
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 249 NLSDTTAGVISLYCGTSLYSFSYVGLSNNT---WLFNLSRTFPLDHF 118
+LSD VIS G + Y F V LS+ T W N + +P+ F
Sbjct: 222 SLSDYWGRVISRTLGDTTYGFPNVSLSSITSQEWYRNANFPYPIITF 268
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.4 bits (53), Expect = 4.5
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = -2
Query: 387 IVYATGSSPLVARV*ITCPWCWTTCLMRPFSLSSMSAXLXREPRTFNLSDTTAGVISLYC 208
I+Y T ++P++ + +T CW L P + P + SD ++
Sbjct: 260 ILYKTNNNPIILPITVTVCSCWWLILSTPL------CTIVTLPVENHSSDAILTLLYNSV 313
Query: 207 GTSLYSFSYVGLSNNTWLFNLSRTF 133
S +SF + ++ LF SR F
Sbjct: 314 KESYHSFKHAMSISSIRLFLFSRLF 338
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 6.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 25 PAQEGREGFGQTASKNTEXEGRIRWRQSQEEEVVQRKSS*QVEQ 156
P QE RE S ++ + R+RW+ E + ++K + E+
Sbjct: 207 PEQELRENVRDPYSLLSKIQPRVRWQSHMESQKKKQKEEAEKEK 250
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 25.0 bits (52), Expect = 6.0
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 225 VISLYCGTSLYSFSYV-GLSNNTWLFNLSRTFPLDHFFFLALPPP 94
V+ + C +L F ++ G+ N T P +F+ L PPP
Sbjct: 37 VVVIICIAALIFFFFIIGIINRRRTKKGQATIPFTNFYPLTAPPP 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,636,888
Number of Sequences: 5004
Number of extensions: 31281
Number of successful extensions: 113
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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