Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D24
         (484 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p pro...   171   4e-43
AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB...   171   4e-43
AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA...   171   4e-43
U03289-1|AAA03464.1|  113|Drosophila melanogaster protein ( Dros...   163   9e-41
X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin prot...    28   5.8  
AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p pro...    28   5.8  
AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC...    28   5.8  
AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB...    28   5.8  
AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA...    28   5.8  

>AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p
           protein.
          Length = 117

 Score =  171 bits (416), Expect = 4e-43
 Identities = 85/115 (73%), Positives = 90/115 (78%)
 Frame = +2

Query: 26  PPKKDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPTYEKLYKEV 205
           PPKKDAK+SAKQPQKTQ                    VRDKLNNQVLFDK TYEKLYKEV
Sbjct: 2   PPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEV 61

Query: 206 PQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQVIYTRATKGDD 370
           P YKLITP+VVSERLK+RGSL + ALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 62  PAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116


>AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB,
           isoform B protein.
          Length = 117

 Score =  171 bits (416), Expect = 4e-43
 Identities = 85/115 (73%), Positives = 90/115 (78%)
 Frame = +2

Query: 26  PPKKDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPTYEKLYKEV 205
           PPKKDAK+SAKQPQKTQ                    VRDKLNNQVLFDK TYEKLYKEV
Sbjct: 2   PPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEV 61

Query: 206 PQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQVIYTRATKGDD 370
           P YKLITP+VVSERLK+RGSL + ALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 62  PAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116


>AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA,
           isoform A protein.
          Length = 117

 Score =  171 bits (416), Expect = 4e-43
 Identities = 85/115 (73%), Positives = 90/115 (78%)
 Frame = +2

Query: 26  PPKKDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPTYEKLYKEV 205
           PPKKDAK+SAKQPQKTQ                    VRDKLNNQVLFDK TYEKLYKEV
Sbjct: 2   PPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEV 61

Query: 206 PQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQVIYTRATKGDD 370
           P YKLITP+VVSERLK+RGSL + ALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 62  PAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116


>U03289-1|AAA03464.1|  113|Drosophila melanogaster protein (
           Drosophila melanogasterSevelin ribosomal protein homolog
           gene, partial cds. ).
          Length = 113

 Score =  163 bits (397), Expect = 9e-41
 Identities = 82/112 (73%), Positives = 87/112 (77%)
 Frame = +2

Query: 35  KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPTYEKLYKEVPQY 214
           KDAK+SAKQPQKTQ                    VRDKLNNQVLFDK TYEKLYKEVP Y
Sbjct: 1   KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60

Query: 215 KLITPAVVSERLKVRGSLXRXALIELREKGLIKQVVQHHGQVIYTRATKGDD 370
           KLITP+VVSERLK+RGSL + ALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61  KLITPSVVSERLKIRGSLDKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 112


>X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin
           protein.
          Length = 1023

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  QTMPAQEGREGFGQTASKNTEXEGRIRWRQSQEEEVVQRK 135
           Q  P QE RE   +   +  E E R+R ++ QEE + Q++
Sbjct: 673 QRYPQQEPREQQDERIRQQREQEERLRQQREQEERLRQQR 712


>AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p
           protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  QTMPAQEGREGFGQTASKNTEXEGRIRWRQSQEEEVVQRK 135
           Q  P QE RE   +   +  E E R+R ++ QEE + Q++
Sbjct: 673 QRYPQQEPREQQDERIRQQREQEERLRQQREQEERLRQQR 712


>AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC,
           isoform C protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  QTMPAQEGREGFGQTASKNTEXEGRIRWRQSQEEEVVQRK 135
           Q  P QE RE   +   +  E E R+R ++ QEE + Q++
Sbjct: 673 QRYPQQEPREQQDERIRQQREQEERLRQQREQEERLRQQR 712


>AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB,
           isoform B protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  QTMPAQEGREGFGQTASKNTEXEGRIRWRQSQEEEVVQRK 135
           Q  P QE RE   +   +  E E R+R ++ QEE + Q++
Sbjct: 673 QRYPQQEPREQQDERIRQQREQEERLRQQREQEERLRQQR 712


>AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA,
           isoform A protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  QTMPAQEGREGFGQTASKNTEXEGRIRWRQSQEEEVVQRK 135
           Q  P QE RE   +   +  E E R+R ++ QEE + Q++
Sbjct: 673 QRYPQQEPREQQDERIRQQREQEERLRQQREQEERLRQQR 712


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,265,674
Number of Sequences: 53049
Number of extensions: 358313
Number of successful extensions: 870
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)