Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_D23
(486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VSC1 Cluster: Signal recognition particle 9 kDa prote... 92 7e-18
UniRef50_P49458 Cluster: Signal recognition particle 9 kDa prote... 83 3e-15
UniRef50_P34642 Cluster: Signal recognition particle 9 kDa prote... 77 2e-13
UniRef50_Q9SMU7 Cluster: Signal recognition particle 9 kDa prote... 68 1e-10
UniRef50_Q4N7J3 Cluster: Signal recognition particle, putative; ... 68 1e-10
UniRef50_A7ARX9 Cluster: Signal recognition particle SRP9 subuni... 57 2e-07
UniRef50_Q55QP8 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q55GL2 Cluster: Signal recognition particle 9 kDa subun... 54 1e-06
UniRef50_Q6NVX0 Cluster: SRP9 protein; n=7; Euteleostomi|Rep: SR... 54 2e-06
UniRef50_Q4PBZ7 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_A2YBE3 Cluster: Putative uncharacterized protein; n=2; ... 45 0.001
UniRef50_Q8IBG9 Cluster: Signal recognition particle, putative; ... 44 0.002
UniRef50_A2DMD3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.069
UniRef50_UPI0000499521 Cluster: hypothetical protein 188.t00016;... 36 0.64
UniRef50_UPI0000DAE870 Cluster: hypothetical protein Rgryl_01000... 34 1.5
UniRef50_Q8EYZ1 Cluster: Putative uncharacterized protein; n=4; ... 33 2.6
UniRef50_A2GMB9 Cluster: Putative uncharacterized protein; n=3; ... 33 4.5
UniRef50_A0L0W5 Cluster: Major facilitator superfamily MFS_1; n=... 32 6.0
UniRef50_A5KAJ6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_A6C8J4 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
>UniRef50_Q9VSC1 Cluster: Signal recognition particle 9 kDa protein
homolog; n=4; Diptera|Rep: Signal recognition particle 9
kDa protein homolog - Drosophila melanogaster (Fruit
fly)
Length = 77
Score = 91.9 bits (218), Expect = 7e-18
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 404
M FV NW++F A E +YL +P N R ++KY+HSKG +K+TDN KC+QYK E D+R
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60
Query: 405 KIXKFMSNLLRHMASND 455
KI K SNL+ HMAS +
Sbjct: 61 KIEKITSNLVGHMASKE 77
>UniRef50_P49458 Cluster: Signal recognition particle 9 kDa protein;
n=18; Coelomata|Rep: Signal recognition particle 9 kDa
protein - Homo sapiens (Human)
Length = 86
Score = 83.0 bits (196), Expect = 3e-15
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +3
Query: 243 WEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKIXKFM 422
WEEF +AAE LYL DP+ R +KY HS G VK+TD+ CL YKT+ QDV+KI KF
Sbjct: 7 WEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFH 66
Query: 423 SNLLRHMASND 455
S L+R M + +
Sbjct: 67 SQLMRLMVAKE 77
>UniRef50_P34642 Cluster: Signal recognition particle 9 kDa protein
homolog; n=6; Bilateria|Rep: Signal recognition particle
9 kDa protein homolog - Caenorhabditis elegans
Length = 76
Score = 77.0 bits (181), Expect = 2e-13
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 404
MT+ +W+EF KAAE L+ +P R+ KY+H+KG +K+TD+ CLQY T QDV+
Sbjct: 1 MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVK 60
Query: 405 KIXKFMSNLLR 437
K+ K S LLR
Sbjct: 61 KLEKLSSTLLR 71
>UniRef50_Q9SMU7 Cluster: Signal recognition particle 9 kDa protein;
n=7; Magnoliophyta|Rep: Signal recognition particle 9
kDa protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 68.1 bits (159), Expect = 1e-10
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 404
M ++ +W+EF + L+ DP +TRY +KY H G +K+TDNK+CL++KT+ Q+ +
Sbjct: 1 MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60
Query: 405 KIXKFMSNLLRHMA 446
K+ K + MA
Sbjct: 61 KMEKLNNIFFTLMA 74
>UniRef50_Q4N7J3 Cluster: Signal recognition particle, putative;
n=1; Theileria parva|Rep: Signal recognition particle,
putative - Theileria parva
Length = 105
Score = 67.7 bits (158), Expect = 1e-10
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 404
MT+ NW EF A +LY + P+ T+Y KY KG +K+TDNK+C +++ + + R
Sbjct: 1 MTYFDNWNEFLHEARLLYFRTPLKTKYVFKYIKGKGKITLKVTDNKQCCKFRVDPESSSR 60
Query: 405 KIXKFMSNLLRHMASND 455
I +F + L S D
Sbjct: 61 LINQFNALFLNWSVSKD 77
>UniRef50_A7ARX9 Cluster: Signal recognition particle SRP9 subunit,
putative; n=1; Babesia bovis|Rep: Signal recognition
particle SRP9 subunit, putative - Babesia bovis
Length = 102
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 404
MT+ W F +AA L+L P+ TRYSVKY + +K+TD++KC ++K ++R
Sbjct: 1 MTYYDTWNGFIQAAHTLFLAQPLKTRYSVKYVKGTESIVLKVTDDRKCCKFKLAKSGNLR 60
Query: 405 KIXKFMSNLLRHMASND 455
++ + L + D
Sbjct: 61 QLNQLNKLFLTWSVTRD 77
>UniRef50_Q55QP8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 142
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKT 383
M ++ NW +F AA LY + P RY VK+ G +KITD+ KC++YKT
Sbjct: 1 MVYIKNWTDFEAAATDLYARSPNKVRYCVKFQPKTGHLVLKITDDLKCIKYKT 53
>UniRef50_Q55GL2 Cluster: Signal recognition particle 9 kDa subunit;
n=1; Dictyostelium discoideum AX4|Rep: Signal
recognition particle 9 kDa subunit - Dictyostelium
discoideum AX4
Length = 75
Score = 54.4 bits (125), Expect = 1e-06
Identities = 22/69 (31%), Positives = 42/69 (60%)
Frame = +3
Query: 231 FVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKI 410
++ +W+EF +E LY DP TR+S K+ H +G +K+T++ L+++T+ + D ++I
Sbjct: 2 YIEDWDEFYDKSEQLYRTDPKRTRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKRI 61
Query: 411 XKFMSNLLR 437
+ S R
Sbjct: 62 DQINSLFFR 70
>UniRef50_Q6NVX0 Cluster: SRP9 protein; n=7; Euteleostomi|Rep: SRP9
protein - Homo sapiens (Human)
Length = 82
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 243 WEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDN--KKCLQYKTEVQ 392
WEEF +AAE LYL DP+ R +KY HS G VK+TD+ ++CL +Q
Sbjct: 7 WEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVRQCLALLLRLQ 58
>UniRef50_Q4PBZ7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 145
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 404
M ++ +W EF + + LY Q+P +RY +K S + +K+TD+ ++Y+T +
Sbjct: 1 MVYIKDWPEFQQRSIKLYRQNPHKSRYLIKSRPSTHSLTLKVTDDTTTIKYRTRSSAILG 60
Query: 405 KIXKFMSNLLRHMASND 455
++ F ++ MA ++
Sbjct: 61 RLEVFNKAMMLAMAGSE 77
>UniRef50_A2YBE3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 81
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQY 377
M + +W+EF + L+ P TRY VKY H +G +K+TDN + + +
Sbjct: 1 MVYFDSWDEFVSKSVELFRNHPDTTRYVVKYRHCEGKLVLKVTDNHENIHW 51
>UniRef50_Q8IBG9 Cluster: Signal recognition particle, putative;
n=3; Plasmodium|Rep: Signal recognition particle,
putative - Plasmodium falciparum (isolate 3D7)
Length = 109
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +3
Query: 222 VMTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDV 401
++ + +W +F + + P TRY +K VK+TDN + YK + ++
Sbjct: 6 ILVYAESWNDFIHTTRNIISKSPDKTRYVIKLHRPSETIIVKVTDNNNSIMYKLDKNDNM 65
Query: 402 RKIXKFMSNLL 434
+KI + S L
Sbjct: 66 KKIEELNSLFL 76
>UniRef50_A2DMD3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 106
Score = 38.7 bits (86), Expect = 0.069
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +3
Query: 216 LAVMTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQ 395
+ ++T + +EE KA EM+ DP TR + KY F +KI + K + E +
Sbjct: 28 MVLLTDIKVFEE--KAKEMIQA-DPKKTRLTTKYKKDSHIFVMKIFNGKDAYKINIEKEN 84
Query: 396 DVRKIXKFMSNLLRHMASND 455
D ++ + +S+LL H+ +N+
Sbjct: 85 DFKESQRIISSLL-HLMTNE 103
>UniRef50_UPI0000499521 Cluster: hypothetical protein 188.t00016;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 188.t00016 - Entamoeba histolytica HM-1:IMSS
Length = 78
Score = 35.5 bits (78), Expect = 0.64
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +3
Query: 234 VPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKIX 413
V + +F + AE L+ + NTRY +KY +K+TDN K Y + ++++ +
Sbjct: 3 VESLAKFREYAEALFRANQ-NTRYFMKYRDDDLIITLKVTDNVKTYTYDIKDRKEMNAVT 61
Query: 414 KFMSNLLRHMA 446
+ ++ +M+
Sbjct: 62 ELNMKMMSYMS 72
>UniRef50_UPI0000DAE870 Cluster: hypothetical protein Rgryl_01000560;
n=4; Rickettsiella grylli|Rep: hypothetical protein
Rgryl_01000560 - Rickettsiella grylli
Length = 4172
Score = 34.3 bits (75), Expect = 1.5
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +3
Query: 225 MTFVPNWEEFXKAAEMLYLQ-DPINTRYSVKYS-HSKGAFNVK-ITDNKK 365
++ V W+EF K E L LQ DPI YSV S HS G + +K +T +KK
Sbjct: 2604 LSAVELWDEFGK-RETLELQIDPITHTYSVDLSHHSSGVYQLKPLTQDKK 2652
>UniRef50_Q8EYZ1 Cluster: Putative uncharacterized protein; n=4;
Leptospira|Rep: Putative uncharacterized protein -
Leptospira interrogans
Length = 371
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 291 INTRYSVK-YSHSKGAFNVKITDNKKCLQYK-TEVQQDVRKIXKFMS 425
+ +SVK S KG F++KI +N+ L + E+QQDV I F+S
Sbjct: 106 VTKEFSVKELSAEKGKFDLKIENNRMSLNSEGIEIQQDVENIKLFLS 152
>UniRef50_A2GMB9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 494
Score = 32.7 bits (71), Expect = 4.5
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -3
Query: 418 NLXIFLTSCCTSVLY*RHFLLSVILTLNAPFECEYLTLYRVFIGSCRYNISAAXSNSSQF 239
NL FL TS Y + F SV N P CEYL + V I + N +A +++Q+
Sbjct: 260 NLQAFLVYLDTSKNYKKCFPFSV--RFNFPSLCEYLISHGVDINTRDKNYYSAFFHAAQY 317
Query: 238 GTKVI 224
G ++I
Sbjct: 318 GNRLI 322
>UniRef50_A0L0W5 Cluster: Major facilitator superfamily MFS_1; n=6;
Alteromonadales|Rep: Major facilitator superfamily MFS_1
- Shewanella sp. (strain ANA-3)
Length = 391
Score = 32.3 bits (70), Expect = 6.0
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -3
Query: 118 DWIYALNYN*GILIMYLCMYSFY 50
+W YAL Y+ G+L Y+C+++FY
Sbjct: 216 NWAYALTYS-GLLSFYICLFTFY 237
>UniRef50_A5KAJ6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 733
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 321 HSKGAFNVKIT-DNKKCLQYKTEVQQDVRKIXKFMSNLLRHM 443
H KG+F+ K+T + KK +Y +Q D+ + K +++ +H+
Sbjct: 507 HQKGSFHSKVTLEMKKIKEYMANMQNDIVEYVKDLNSYFKHL 548
>UniRef50_A6C8J4 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 564
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 153 IVQYLHIRGLFLKTFLVNSQ*LAVMTFVPN----WEEFXKAAEMLYLQDPINTRYSVKYS 320
I ++H+RG + F+ ++ VPN W+ + ++ + L D + ++VK+
Sbjct: 391 IAPHMHLRGKSFRLFMKQKDESEILLDVPNYDFNWQHIYELSQPMKLDDVDSLEFTVKFD 450
Query: 321 HSK 329
+SK
Sbjct: 451 NSK 453
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,636,510
Number of Sequences: 1657284
Number of extensions: 7606240
Number of successful extensions: 15859
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15854
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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