Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D23
         (486 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22177-3|CAA80148.1|   76|Caenorhabditis elegans Hypothetical pr...    77   9e-15
AC006629-10|ABC48257.1|  312|Caenorhabditis elegans Hypothetical...    29   2.4  
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ...    28   3.1  
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ...    28   3.1  
AF022975-10|AAB70668.2|  661|Caenorhabditis elegans Hypothetical...    27   7.2  

>Z22177-3|CAA80148.1|   76|Caenorhabditis elegans Hypothetical
           protein ZK512.4 protein.
          Length = 76

 Score = 76.6 bits (180), Expect = 9e-15
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = +3

Query: 225 MTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 404
           MT+  +W+EF KAAE L+  +P   R+  KY+H+KG   +K+TD+  CLQY T   QDV+
Sbjct: 1   MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVK 60

Query: 405 KIXKFMSNLLR 437
           K+ K  S LLR
Sbjct: 61  KLEKLSSTLLR 71


>AC006629-10|ABC48257.1|  312|Caenorhabditis elegans Hypothetical
           protein F12E12.8 protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 10/34 (29%), Positives = 24/34 (70%)
 Frame = -1

Query: 282 VDITFPRLXQTLPNLEQKSLRPIIDYSLGMFLKI 181
           ++IT+  + +T+ NLE  S+R +I++ + +F ++
Sbjct: 86  IEITYENVKRTIRNLEGYSVRSVIEHFMAIFDRV 119


>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
           protein C02E11.1b protein.
          Length = 1123

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = +3

Query: 195 FLVNSQ*LAVMTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQ 374
           F ++   L V T   +   F  A   LY    I+   ++K   S+G+ NV  T N KC  
Sbjct: 191 FKISGYQLEVHTRTESMNPFVDAVMTLYATSSIDLP-NIKCVGSEGSLNVPSTHNVKCSI 249

Query: 375 YKTE 386
            KT+
Sbjct: 250 GKTD 253


>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
           protein C02E11.1a protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = +3

Query: 195 FLVNSQ*LAVMTFVPNWEEFXKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQ 374
           F ++   L V T   +   F  A   LY    I+   ++K   S+G+ NV  T N KC  
Sbjct: 189 FKISGYQLEVHTRTESMNPFVDAVMTLYATSSIDLP-NIKCVGSEGSLNVPSTHNVKCSI 247

Query: 375 YKTE 386
            KT+
Sbjct: 248 GKTD 251


>AF022975-10|AAB70668.2|  661|Caenorhabditis elegans Hypothetical
           protein K09C6.1 protein.
          Length = 661

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 315 YSHSKGAFNVKITDNKKCLQYKTEVQ 392
           +S ++  FN+KITD  +C+  K E++
Sbjct: 179 FSVNQHPFNIKITDYSRCMTRKPEMK 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,894,708
Number of Sequences: 27780
Number of extensions: 197802
Number of successful extensions: 467
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)