Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D17
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -3

Query: 152 VVASLFLRVIYICALIEIVFF*TLSTNNALFNYKYRDFSGCFFGGIVTK 6
           VV  LF  V     L+  +    + TNN  F +KY  FS C+F  I+++
Sbjct: 58  VVKRLFAMVRIFYYLVIPLIASVILTNNRFFIFKYLTFSICYFLFIISQ 106


>Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical
           protein C40H1.9 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 191 GPHVPSQRFY*IQVVASLFLRVIYICALIEIVFF*TLSTNNALFNYKYRDF 39
           G H P+Q    ++ +   ++ +++   L+ +VF  TL    A   YKY DF
Sbjct: 137 GSHGPNQNNQILEGMTREYVLILFFIILVSVVFIHTL----AKVQYKYPDF 183


>AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical
           protein C09D4.2 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 299 VSQNTGTCPESSCACPETSCAC 364
           +S  TG+  E+ CAC   +CAC
Sbjct: 126 LSLRTGSSNENGCACVHGNCAC 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,661,311
Number of Sequences: 27780
Number of extensions: 94383
Number of successful extensions: 251
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)