Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D16
         (363 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2W2R7 Cluster: Methyl-accepting chemotaxis protein; n=...    32   2.7  
UniRef50_Q82HM3 Cluster: Putative uncharacterized protein; n=1; ...    32   3.6  
UniRef50_Q9DBF3 Cluster: Adult male liver cDNA, RIKEN full-lengt...    31   8.3  
UniRef50_Q4UF90 Cluster: G-beta protein, transducin-like, putati...    31   8.3  

>UniRef50_Q2W2R7 Cluster: Methyl-accepting chemotaxis protein; n=2;
           Magnetospirillum|Rep: Methyl-accepting chemotaxis
           protein - Magnetospirillum magneticum (strain AMB-1 /
           ATCC 700264)
          Length = 570

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +2

Query: 20  IXIFRERGTNRHRVVAIRYARLRSESRGCDLPENRTTPDFLNN*TYILNSSTDHQH 187
           + IF+E G  RHR+ A + A   + +R  +  E R T DF ++   +LN  T+  H
Sbjct: 262 LEIFKENGQARHRLEAAQAAEQAARNRRQEAIE-RLTTDFNSSVFAVLNGVTESAH 316


>UniRef50_Q82HM3 Cluster: Putative uncharacterized protein; n=1;
           Streptomyces avermitilis|Rep: Putative uncharacterized
           protein - Streptomyces avermitilis
          Length = 368

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +2

Query: 32  RERGTNRHRVVAIRYARLRSESRGCDLPENRTTP 133
           R R   RHRV+ +    LR    G   PE RTTP
Sbjct: 283 RRRAPGRHRVLKLPELTLRLPKPGAPAPETRTTP 316


>UniRef50_Q9DBF3 Cluster: Adult male liver cDNA, RIKEN full-length
           enriched library, clone:1300013E18
           product:McKusick-Kaufman syndrome protein, full insert
           sequence; n=3; Eutheria|Rep: Adult male liver cDNA,
           RIKEN full-length enriched library, clone:1300013E18
           product:McKusick-Kaufman syndrome protein, full insert
           sequence - Mus musculus (Mouse)
          Length = 502

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -3

Query: 154 CSII*KIRCCPVLGEVAAS*LRPQTCVAYSDYSMTVCSSFTKN 26
           C +   I CC ++  +    L P T +  + Y +++C+S+ K+
Sbjct: 91  CGLFTAILCCNLIENIQRLDLTPATAIKLNKYLLSLCTSYLKS 133


>UniRef50_Q4UF90 Cluster: G-beta protein, transducin-like, putative;
           n=2; Theileria|Rep: G-beta protein, transducin-like,
           putative - Theileria annulata
          Length = 956

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -2

Query: 194 ETNADDQLTSLKCMFNYLKNPV---LSGSRGGRSLLTPTSNVRS 72
           E N  D L SLK  +N+LKN +   LSG +G  +  T  +NV S
Sbjct: 345 EDNESDDLNSLKSKYNHLKNLLSNNLSGDKGMTNDDTQDNNVDS 388


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,513,469
Number of Sequences: 1657284
Number of extensions: 4120225
Number of successful extensions: 9670
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9667
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)