Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D16
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   6.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    20   6.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   9.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   9.0  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 41  GTNRHRVVAIRYARLRSESRGCDLPENRTTPDFLNN*TY 157
           G  R  + A   A   + + G D+PE     DF+N  TY
Sbjct: 670 GQPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTY 708


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 252 KLRHYNEHYGIISFVTVE 199
           KL+H N + G   F TVE
Sbjct: 234 KLKHDNSNEGGEGFATVE 251


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 266 MFLEFILNSNVTN 304
           +FLE + N N TN
Sbjct: 114 IFLETVANENTTN 126


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 101 GCDLPENRTTPDFLNN*TYILNSSTDH 181
           G   P NR T   +   T+  +++T H
Sbjct: 261 GTSSPSNRFTRHLIQRRTHTRHTTTSH 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,746
Number of Sequences: 336
Number of extensions: 1038
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)