Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D13
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ141697-1|AAZ73088.1|  578|Drosophila melanogaster NDC1 protein.      42   5e-04
AY061468-1|AAL29016.1|  578|Drosophila melanogaster LD42327p pro...    42   5e-04
AE014297-3404|AAF56202.1|  578|Drosophila melanogaster CG5857-PA...    42   5e-04
AY118994-1|AAM50854.1|  545|Drosophila melanogaster LP02775p pro...    30   2.7  
AE014297-2681|AAF55683.2|  545|Drosophila melanogaster CG16727-P...    30   2.7  
BT022488-1|AAY54904.1|  446|Drosophila melanogaster IP11787p pro...    28   8.3  
AE014297-1215|AAF54567.2|  446|Drosophila melanogaster CG14694-P...    28   8.3  

>DQ141697-1|AAZ73088.1|  578|Drosophila melanogaster NDC1 protein.
          Length = 578

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/129 (20%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
 Frame = +3

Query: 153 RLIISVLWNIGLQAVIAVMLVGFIQIDILHPVSWISSSINDVFGW-KMXINIVLLGLVSF 329
           R + +VL ++ +Q ++  + + F+   +LHP++W++ ++  V  W     +I L+  V  
Sbjct: 17  RCLRAVLLSVAIQFLLLTVFLLFVNFQLLHPLAWVTGTLRLVASWYTWFASIPLVASVVL 76

Query: 330 FQAYIYGCYYVKPLPKYFTRFSMFLSLFCTQNIIFSILYALSGYFTMSLYSSLAKSNFNT 509
           +   +  C       +Y      +L  +  + ++F   + L G  T  LY+    +++  
Sbjct: 77  YGVIL--CQQHLSERRYCPTRYRWLLHYGPRKVLFLFAHLLVGLLTAWLYTGYLHTDYQH 134

Query: 510 LXKICXNYD 536
           L   C   D
Sbjct: 135 LKYKCYGQD 143


>AY061468-1|AAL29016.1|  578|Drosophila melanogaster LD42327p
           protein.
          Length = 578

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/129 (20%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
 Frame = +3

Query: 153 RLIISVLWNIGLQAVIAVMLVGFIQIDILHPVSWISSSINDVFGW-KMXINIVLLGLVSF 329
           R + +VL ++ +Q ++  + + F+   +LHP++W++ ++  V  W     +I L+  V  
Sbjct: 17  RCLRAVLLSVAIQFLLLTVFLLFVNFQLLHPLAWVTGTLRLVASWYTWFASIPLVASVVL 76

Query: 330 FQAYIYGCYYVKPLPKYFTRFSMFLSLFCTQNIIFSILYALSGYFTMSLYSSLAKSNFNT 509
           +   +  C       +Y      +L  +  + ++F   + L G  T  LY+    +++  
Sbjct: 77  YGVIL--CQQHLSERRYCPTRYRWLLHYGPRKVLFLFAHLLVGLLTAWLYTGYLHTDYQH 134

Query: 510 LXKICXNYD 536
           L   C   D
Sbjct: 135 LKYKCYGQD 143


>AE014297-3404|AAF56202.1|  578|Drosophila melanogaster CG5857-PA
           protein.
          Length = 578

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/129 (20%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
 Frame = +3

Query: 153 RLIISVLWNIGLQAVIAVMLVGFIQIDILHPVSWISSSINDVFGW-KMXINIVLLGLVSF 329
           R + +VL ++ +Q ++  + + F+   +LHP++W++ ++  V  W     +I L+  V  
Sbjct: 17  RCLRAVLLSVAIQFLLLTVFLLFVNFQLLHPLAWVTGTLRLVASWYTWFASIPLVASVVL 76

Query: 330 FQAYIYGCYYVKPLPKYFTRFSMFLSLFCTQNIIFSILYALSGYFTMSLYSSLAKSNFNT 509
           +   +  C       +Y      +L  +  + ++F   + L G  T  LY+    +++  
Sbjct: 77  YGVIL--CQQHLSERRYCPTRYRWLLHYGPRKVLFLFAHLLVGLLTAWLYTGYLHTDYQH 134

Query: 510 LXKICXNYD 536
           L   C   D
Sbjct: 135 LKYKCYGQD 143


>AY118994-1|AAM50854.1|  545|Drosophila melanogaster LP02775p
           protein.
          Length = 545

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 300 NIVLLGLVSFFQAY--IYGCYYVKPLPKYFTRFSMFL-SLFC 416
           NI ++GL S   A+  IY   Y KPLP  F    MFL +L C
Sbjct: 454 NIHVVGLASSSLAFYVIYLAQYYKPLPSIFISVLMFLGALLC 495


>AE014297-2681|AAF55683.2|  545|Drosophila melanogaster CG16727-PA
           protein.
          Length = 545

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 300 NIVLLGLVSFFQAY--IYGCYYVKPLPKYFTRFSMFL-SLFC 416
           NI ++GL S   A+  IY   Y KPLP  F    MFL +L C
Sbjct: 454 NIHVVGLASSSLAFYVIYLAQYYKPLPSIFISVLMFLGALLC 495


>BT022488-1|AAY54904.1|  446|Drosophila melanogaster IP11787p
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +3

Query: 201 AVMLVGFIQIDILHPVSWISSSINDVFGWKMXINIVLLGLVSFFQAYIYGCYYVKPLPKY 380
           A+ L GF+QI     V W S        W   +++ L  L + F A + G ++   L   
Sbjct: 254 AISLAGFLQITTYMQVVWKSFENEPTIAWNGAVDVALTLLSAVF-ALLAGYFHAGRLNTR 312

Query: 381 FTRFSMFL 404
            +  SM L
Sbjct: 313 SSLLSMAL 320


>AE014297-1215|AAF54567.2|  446|Drosophila melanogaster CG14694-PA
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +3

Query: 201 AVMLVGFIQIDILHPVSWISSSINDVFGWKMXINIVLLGLVSFFQAYIYGCYYVKPLPKY 380
           A+ L GF+QI     V W S        W   +++ L  L + F A + G ++   L   
Sbjct: 254 AISLAGFLQITTYMQVVWKSFENEPTIAWNGAVDVALTLLSAVF-ALLAGYFHAGRLNTR 312

Query: 381 FTRFSMFL 404
            +  SM L
Sbjct: 313 SSLLSMAL 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,653,498
Number of Sequences: 53049
Number of extensions: 467374
Number of successful extensions: 1005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)