Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D13
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021503-4|CAA16418.1|  352|Caenorhabditis elegans Hypothetical ...    30   1.1  
AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm rece...    30   1.4  
Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z46343-4|CAA86460.1|  336|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z82274-12|CAJ76931.1|  304|Caenorhabditis elegans Hypothetical p...    27   7.6  
Z82274-11|CAB54268.2|  315|Caenorhabditis elegans Hypothetical p...    27   7.6  
Z81587-5|CAB04706.1|  369|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical p...    27   7.6  
AF324487-1|AAK49908.1|  315|Caenorhabditis elegans JC8.12-like p...    27   7.6  

>AL021503-4|CAA16418.1|  352|Caenorhabditis elegans Hypothetical
           protein Y68A4A.7 protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 369 LPKYFTRFSMFLSLFCTQNIIFSILYALSGYFTMSLYSSLAKSNFNTL 512
           LP Y   F   LSLF   N +  ++  L G FT + Y  L +S  +TL
Sbjct: 90  LPMYGMFFVGILSLFSVPNTVQFLIVYLMGTFTSASYVYLFESRSSTL 137


>AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm
           receptor protein 253 protein.
          Length = 354

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 309 LLGLVSFFQAYIYGCYYVKPLPKYFTRFSMFLSLFCTQNIIF 434
           L+  ++FF+   Y   YV   P +FT+ S FL +  T+N IF
Sbjct: 50  LMVYIAFFEL-AYAGLYVAEKPTFFTKDSAFLLITNTKNSIF 90


>Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical
           protein F15A4.7 protein.
          Length = 320

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 171 LWNIGLQAVIAVMLVGFIQIDILHPVSWISSSI 269
           LWNI +  VIA  + G   +D +  V W S S+
Sbjct: 165 LWNIMISQVIASSVRGGFGVDYIKAVKWASLSL 197


>Z46343-4|CAA86460.1|  336|Caenorhabditis elegans Hypothetical
           protein T23F11.5 protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
 Frame = +3

Query: 156 LIISVLWNIGLQAVIAVMLVGFIQIDILHPVSWIS-SSINDVFGWKMXINIVLLGLVSFF 332
           L I ++WN+ +  V A    G   ++ +  VSW S S ++  +     I I+++  V+ +
Sbjct: 167 LPIGIIWNVLISRVYANPSFGGFSVNYIKLVSWASLSKLHLTYFIVSLILIIVISGVTLY 226

Query: 333 QAYIYGCYYVKPLPKYFTRFSMFLSLFCTQNIIFSILYA 449
              I   + +K   +  T  +M LSL  +   +  I +A
Sbjct: 227 ALLILK-HRIKSAEQTLTIATMVLSLEFSFLSVIQIYFA 264


>Z82274-12|CAJ76931.1|  304|Caenorhabditis elegans Hypothetical
           protein JC8.12b protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +3

Query: 426 IIFSILYALSGYFTMSLYSSLAKSNFNTLXKI 521
           +I SILY +S + T++ +  +A  NF+++ ++
Sbjct: 65  VIPSILYTISQWITVASFEGIAMPNFDSVKRL 96


>Z82274-11|CAB54268.2|  315|Caenorhabditis elegans Hypothetical
           protein JC8.12a protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +3

Query: 426 IIFSILYALSGYFTMSLYSSLAKSNFNTLXKI 521
           +I SILY +S + T++ +  +A  NF+++ ++
Sbjct: 76  VIPSILYTISQWITVASFEGIAMPNFDSVKRL 107


>Z81587-5|CAB04706.1|  369|Caenorhabditis elegans Hypothetical
           protein T06G6.7 protein.
          Length = 369

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = +3

Query: 192 AVIAVMLVGFIQIDILHPVSWISSSINDVFGWKMXINIVLLGLV---SFFQAYIYGCYYV 362
           +V+ V+L+ F  + IL   S   SS+N +       +++ +G +    FF+  + G +  
Sbjct: 28  SVLGVILISF-HLLILTKKSMRISSVNSIMIGIAICDLLSMGNMVRSEFFEINLQGTHCK 86

Query: 363 KPLPKYFTRFSMFLSLFCT 419
            P     T+F+ FL+ F T
Sbjct: 87  PPASLRLTQFNWFLTSFHT 105


>Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical
           protein ZC455.8a protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +3

Query: 342 IYGCYYVKPLPKYFTRFSMFLSLFCTQNIIFSILYALSGYFTMSLYSSLAKSNFNTLXKI 521
           I GC +     +Y+T   + + LF   + +   +  LS    M+L + L+K+N+  +   
Sbjct: 162 ILGCTWNDCFLQYWTGNKLIIGLFTCMSSLILFVKLLSLKKAMNLNNDLSKTNYLCIGDA 221

Query: 522 C 524
           C
Sbjct: 222 C 222


>AF324487-1|AAK49908.1|  315|Caenorhabditis elegans JC8.12-like
           protein protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +3

Query: 426 IIFSILYALSGYFTMSLYSSLAKSNFNTLXKI 521
           +I SILY +S + T++ +  +A  NF+++ ++
Sbjct: 76  VIPSILYTISQWITVASFEGIAMPNFDSVKRL 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,139,650
Number of Sequences: 27780
Number of extensions: 265870
Number of successful extensions: 668
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)