Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D12
         (535 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_763| Best HMM Match : No HMM Matches (HMM E-Value=.)               101   5e-22
SB_9232| Best HMM Match : Coq4 (HMM E-Value=1.8)                       33   0.19 
SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45)           28   4.2  
SB_52215| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_38691| Best HMM Match : UPF0014 (HMM E-Value=2.2)                   27   9.6  

>SB_763| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 192

 Score =  101 bits (241), Expect = 5e-22
 Identities = 54/124 (43%), Positives = 78/124 (62%)
 Frame = +3

Query: 126 VRLLTRLRVVDNSEIGMRAMAEGKPPKVICVYNKQRVGFIGDRVMVAIKGQKXKGILVGL 305
           + LLTR  VVDNS +G R     KP  +I  Y K++   +GD + VA+ G+  K I+VG 
Sbjct: 78  IGLLTRFNVVDNSALGQRTKRNRKP-YLIGFYRKRKTAEVGDVIRVAVGGKTNKAIVVGT 136

Query: 306 KQTQKVKVPKFDSNNIXLIXDNGTPLGTRIHVPIPTILRTILKXKTHSKGADYTKLLAIA 485
           ++ +   VP++D+NNI L+ DN  PLGTRI  PIPTI+R         + A Y+K+LAIA
Sbjct: 137 RKPKHHSVPRYDNNNIVLVDDNLAPLGTRIKGPIPTIIR--------RRQAKYSKVLAIA 188

Query: 486 TKFV 497
           ++F+
Sbjct: 189 SRFI 192


>SB_9232| Best HMM Match : Coq4 (HMM E-Value=1.8)
          Length = 1392

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 291 ILVGLKQTQKVKVPKFDSNNIXLIXDNGTPLGTRIHVP 404
           +L G K+ + VK PKFD  ++ L+  +GTPL  R + P
Sbjct: 723 VLYGKKRRKLVK-PKFDVGDLELVERDGTPLEGRFYEP 759


>SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45)
          Length = 709

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +2

Query: 170 RNASHGRRKTSESNLCIQQTTCRLYW*QSNGSYQRAKEXRHSCRSQANTKGQSTKV--RQ 343
           R+ S  R  TSE+      T  R+   Q+    +  K  R++  +++NT     ++   Q
Sbjct: 114 RDTSENRSNTSENRSNTSATQVRIGQTQAQHKRESVKHKRNTSENRSNTSATKARIGRTQ 173

Query: 344 QQH 352
           +QH
Sbjct: 174 EQH 176


>SB_52215| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 742

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 324 KVPKFDSNNIXLIXDNGTPLGTRIHVPIPTILRTILK 434
           KVP+ +  N+ L      P GTR H+ IP I++   K
Sbjct: 685 KVPRNEYGNVELFKPTMLPPGTR-HIKIPGIVKMARK 720


>SB_38691| Best HMM Match : UPF0014 (HMM E-Value=2.2)
          Length = 430

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = -1

Query: 442 VXSFKIVRRIVGMGTCILVPRGVPLSXIKXMLLLSNFGTLTFCVCLRPTRMPXFFCPLIA 263
           V   K V+R  G+  C  +   V    +  M  L +   +T C  +RPT +      LI 
Sbjct: 211 VSLIKTVQRKSGVTPCHAIHPTVTPVVVSLMKALKSKSDVTTCHAIRPT-ITSVVVSLIK 269

Query: 262 TITLSP 245
           T+  SP
Sbjct: 270 TVRTSP 275


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,822,792
Number of Sequences: 59808
Number of extensions: 285453
Number of successful extensions: 624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)