Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_D12
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29536-3|AAA68795.2| 179|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical... 30 0.91
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL021566-1|CAA16501.1| 328|Caenorhabditis elegans Hypothetical ... 28 3.7
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 27 6.4
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z80216-9|CAH10778.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z80216-8|CAB02284.2| 261|Caenorhabditis elegans Hypothetical pr... 27 8.5
>U29536-3|AAA68795.2| 179|Caenorhabditis elegans Hypothetical
protein F45E12.5b protein.
Length = 179
Score = 78.6 bits (185), Expect = 3e-15
Identities = 51/129 (39%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Frame = +3
Query: 138 TRLRVVDNSEIGMRAMAEGKPPKVICVYNKQRVGF------IGDRVMVAIKGQKXKGILV 299
TRL VVDNS +G A GK P I VY + R +GD+++VAI+GQ K +V
Sbjct: 57 TRLNVVDNSALGKEADTTGKLPYCIHVYKQGRRAKHMPHAELGDKILVAIRGQMRKAYVV 116
Query: 300 GLK---QTQKVKVPKFDSNNIXLIXDNGTPLGTRIHVPIPTILRTILKXKTHSKGADYTK 470
G +K VP D N I L+ + G PLG RI PIPT K + ++K
Sbjct: 117 GANTHVHYRKHGVPVTDQNMIVLLDEEGNPLGNRITAPIPT------KLMANRGNVQFSK 170
Query: 471 LLAIATKFV 497
+LA+A KF+
Sbjct: 171 VLALANKFI 179
>AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical
protein Y39B6A.41 protein.
Length = 511
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 130 GYLQGF-VLLITLKSECEPWPKENLRK*FVYTTNNVSALLVT 252
G LQGF V+LI +EC P K L F+ + + LLVT
Sbjct: 125 GMLQGFRVVLIIWIAECSPDSKRGLTSLFINSGGVIMTLLVT 166
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -3
Query: 329 YFDLLCLLETYKNAFXLLPFDSYHYSVTNKADTLFVVYTNYFRRFSFGHGSH 174
Y DL+ LL+ YKN + F+ + V +N + HG H
Sbjct: 45 YADLIALLDQYKNDLEAVGFNDLEQARRRAPSVDITVGSNSTNLVDYSHGRH 96
>AL021566-1|CAA16501.1| 328|Caenorhabditis elegans Hypothetical
protein F08E10.1 protein.
Length = 328
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = -1
Query: 397 CILVPRGVPLSXIKXMLLLSNFGTLTFCVCLRPT----RMPXFFCPLIATITLSPIKPTR 230
CI+ + +K +L F +C+CL T +P P IA L PI+
Sbjct: 36 CIICKTPAHMKSVKWLL----FNLHCWCICLDITFSFLSIPYILLPAIAGYGLGPIESPG 91
Query: 229 CLLYTQITF 203
Y ITF
Sbjct: 92 LFFYLAITF 100
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 293 NAFXLLPFDSYHYSVTNKADTLFVVYTNYFRRFSFGHGS-HSDFRVINNTK 144
N F LL ++ +S+ + +F +++NY +++ G+G SD V + K
Sbjct: 6 NRFHLLVLLTWQFSIFFASQQIFPIFSNYVPQWTCGNGEPTSDCSVYESCK 56
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 293 NAFXLLPFDSYHYSVTNKADTLFVVYTNYFRRFSFGHGS-HSDFRVINNTK 144
N F LL ++ +S+ + +F +++NY +++ G+G SD V + K
Sbjct: 6 NRFHLLVLLTWQFSIFFASQQIFPIFSNYVPQWTCGNGEPTSDCSVYESCK 56
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 255 LCHQ*SRHVVCCIHKLLSEVFL 190
+CH+ V C+H++LS+V L
Sbjct: 400 ICHKNEGSVATCVHEILSDVLL 421
>Z80216-9|CAH10778.1| 403|Caenorhabditis elegans Hypothetical
protein F10G8.9b protein.
Length = 403
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 174 MRAMAEGKPPKVICVYNKQRVGFI 245
MRA+A G P + ++K+R GF+
Sbjct: 196 MRALARGDQPNISRPFDKKRAGFV 219
>Z80216-8|CAB02284.2| 261|Caenorhabditis elegans Hypothetical
protein F10G8.9a protein.
Length = 261
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 174 MRAMAEGKPPKVICVYNKQRVGFI 245
MRA+A G P + ++K+R GF+
Sbjct: 54 MRALARGDQPNISRPFDKKRAGFV 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,173,558
Number of Sequences: 27780
Number of extensions: 216836
Number of successful extensions: 481
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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