Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_D04
         (390 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0736 - 19145428-19145474,19145608-19145721,19146707-191478...    72   2e-13
02_03_0379 - 18331549-18331595,18331676-18331751                       72   2e-13
11_06_0609 + 25444941-25444946,25445678-25445765,25446013-254460...    36   0.015
02_01_0576 - 4270808-4270871,4271548-4271612,4271717-4271754,427...    36   0.015
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008...    27   4.0  

>04_03_0736 -
           19145428-19145474,19145608-19145721,19146707-19147870,
           19150251-19150383
          Length = 485

 Score = 71.7 bits (168), Expect = 2e-13
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +2

Query: 86  EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRI 190
           EQTEEYVNGQLKNKYGDAFIRGNNVLYIST KR +
Sbjct: 447 EQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTL 481



 Score = 34.7 bits (76), Expect = 0.026
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 28  GVDYRGVLXCLDGYMNIAL 84
           GV  RG+L CLDGYMNIA+
Sbjct: 428 GVTGRGILACLDGYMNIAM 446


>02_03_0379 - 18331549-18331595,18331676-18331751
          Length = 40

 Score = 71.7 bits (168), Expect = 2e-13
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +2

Query: 86  EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRI 190
           EQTEEYVNGQLKNKYGDAFIRGNNVLYIST KR +
Sbjct: 2   EQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTL 36


>11_06_0609 +
           25444941-25444946,25445678-25445765,25446013-25446048,
           25446069-25446106,25446219-25446283,25446622-25446685
          Length = 98

 Score = 35.5 bits (78), Expect = 0.015
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 92  TEEYVNGQLKNKYGDAFIRGNNVLYI 169
           TEEY++GQ     G+  IR NNVLY+
Sbjct: 60  TEEYIDGQFSGNLGEILIRCNNVLYL 85


>02_01_0576 -
           4270808-4270871,4271548-4271612,4271717-4271754,
           4272060-4272147,4272507-4272625,4273682-4273721
          Length = 137

 Score = 35.5 bits (78), Expect = 0.015
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 92  TEEYVNGQLKNKYGDAFIRGNNVLYI 169
           TEEY++GQ     G+  IR NNVLY+
Sbjct: 99  TEEYIDGQFSGNLGEILIRCNNVLYL 124



 Score = 30.3 bits (65), Expect = 0.57
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 13  VKLNSGVDYRGVLXCLDGYMNIAL 84
           VKL  G++Y+G L  +D YMN+ L
Sbjct: 73  VKLKWGMEYKGYLVSVDSYMNLQL 96


>09_03_0039 +
           11799277-11799486,11799565-11799710,11800758-11800860,
           11800996-11801182,11801299-11801392,11801530-11801683,
           11801963-11802067,11802151-11802267,11802688-11802801,
           11803171-11803260,11803875-11804057,11809196-11809550,
           11809574-11809643,11809993-11810167,11810251-11810351,
           11810390-11810516,11810639-11810716,11811926-11812270
          Length = 917

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 187 SSLLCTYIQNIIPTYECIAIFIFQLSVYIFL 95
           S++L  Y+++I+     I  F+F  SVY+ L
Sbjct: 816 SAILSDYVKSIVTLVSYICTFLFPNSVYVIL 846


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,364,396
Number of Sequences: 37544
Number of extensions: 88430
Number of successful extensions: 171
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)