Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C24
         (435 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045645-2|AAC02609.1|  299|Caenorhabditis elegans Hypothetical ...    28   3.4  
Z35600-3|CAA84664.1|  131|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AF000194-1|AAK39376.4|  386|Caenorhabditis elegans Hypothetical ...    27   7.8  

>AF045645-2|AAC02609.1|  299|Caenorhabditis elegans Hypothetical
           protein K02D7.5 protein.
          Length = 299

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = -3

Query: 286 CL*RXPVSREQPKPNEARSDAEDGHFIL*SVELSTCECGSSQEK*A*CLWWERLCSQDSD 107
           C+   P S  Q  PNE RSD ED    L +   ST    S +        ++   S D D
Sbjct: 233 CIVSSPPSSPQKVPNETRSDVEDKFDKLMAETSSTIPSDSRRGSMGSPPSYKSRSSSDPD 292

Query: 106 AGTVTTP 86
             ++ +P
Sbjct: 293 LSSIQSP 299


>Z35600-3|CAA84664.1|  131|Caenorhabditis elegans Hypothetical
           protein F37A8.4 protein.
          Length = 131

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 267 SVGNNQNQMKRGVMPKMAILY 205
           S  NN+NQ+KRG MP    +Y
Sbjct: 109 SYSNNENQIKRGAMPFSGGMY 129


>AF000194-1|AAK39376.4|  386|Caenorhabditis elegans Hypothetical
           protein ZC328.2 protein.
          Length = 386

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 177 SVVPVKKNKRNAYGGKDYAHKIPTQEL*QRHK 82
           S++   +N R      DY HK+  QEL QRH+
Sbjct: 333 SILGTHRNVRRCLSDGDY-HKMAAQELRQRHQ 363


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,774,398
Number of Sequences: 27780
Number of extensions: 190569
Number of successful extensions: 422
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)