Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C23
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.70 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.70 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.93 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 217  GINNHYSNHLHIELENXHTLSDIAR 143
            GINN Y +   + +E   T+S++A+
Sbjct: 1353 GINNEYEDQTEVPVEMRKTVSNLAQ 1377


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 217  GINNHYSNHLHIELENXHTLSDIAR 143
            GINN Y +   + +E   T+S++A+
Sbjct: 1353 GINNEYEDQTEVPVEMRKTVSNLAQ 1377


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 81  IITLLIQFYIINILFRYCYF 22
           II  LIQF  I   F YCY+
Sbjct: 539 IIGCLIQFNTIVFAFCYCYY 558



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 81  IITLLIQFYIINILFRYCYF 22
           II  LIQF  I   F YCY+
Sbjct: 258 IIGCLIQFNTIVFSFCYCYY 277


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 372 WPIICHTXYTSCVMLEFI 319
           WPII    Y+S ++L +I
Sbjct: 214 WPIIMIILYSSLMVLNYI 231


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 350 LVWQIMGQTRMEANFSLRME 409
           LVW + G+T+M A+   +M+
Sbjct: 672 LVWTLPGKTKMIAHLKDKMK 691


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 350 LVWQIMGQTRMEANFSLRME 409
           LVW + G+T+M A+   +M+
Sbjct: 672 LVWTLPGKTKMIAHLKDKMK 691


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 350 LVWQIMGQTRMEANFSLRME 409
           LVW + G+T+M A+   +M+
Sbjct: 672 LVWTLPGKTKMIAHLKDKMK 691


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 350 LVWQIMGQTRMEANFSLRME 409
           LVW + G+T+M A+   +M+
Sbjct: 672 LVWTLPGKTKMIAHLKDKMK 691


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 111 CVQSNCHCFQIITLLIQFYIINILFRYCYFF 19
           C+      F I T+ + FY + I+    Y+F
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLCIYYF 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,027
Number of Sequences: 336
Number of extensions: 2848
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)