Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_C23
(641 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 88 7e-18
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 88 7e-18
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 68 7e-12
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 62 4e-10
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 59 3e-09
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 55 4e-08
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 44 1e-04
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 31 0.60
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_21883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 87.8 bits (208), Expect = 7e-18
Identities = 40/90 (44%), Positives = 55/90 (61%)
Frame = +1
Query: 283 SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDG 462
SIWG +FE E L+H+ SMAN GPNTNGSQFFIT P L K+T++GRV+ G
Sbjct: 8 SIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKG 67
Query: 463 FEXLXDLQXMPVNPKSFXPLTEAKITSVTI 552
+ + + NPK+ P + KI ++T+
Sbjct: 68 MDVAQQISLVKTNPKNDQPYEDIKIINITL 97
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 87.8 bits (208), Expect = 7e-18
Identities = 51/129 (39%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASDY---YNGCLFHRNIKGFIVQXXXXXXXXXXXX-S 285
G I +EL + P NF LC + Y G FHR I F+ Q S
Sbjct: 151 GRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQGGDFTKHNGTGGKS 210
Query: 286 IWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGF 465
I+G KFE E LKH GV SMAN+GPNTNGSQFF+T + L K+ ++G VI+GF
Sbjct: 211 IYGAKFEDE-NFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGF 269
Query: 466 EXLXDLQXM 492
+ + ++ +
Sbjct: 270 DVVRKMEAV 278
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 82.6 bits (195), Expect = 2e-16
Identities = 49/127 (38%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASDY---YNGCLFHRNIKGFIVQXXXXXXXXXXXX-S 285
G I +EL + PK NF ALC + Y G FHR I GF+ Q S
Sbjct: 17 GRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDFTRGDGTGGKS 76
Query: 286 IWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGF 465
I+G KF E LKH G+ SMAN GP TNGSQFF+ + L K+ ++G V DG
Sbjct: 77 IYGAKFADE-NFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGM 135
Query: 466 EXLXDLQ 486
+ + ++
Sbjct: 136 DVVKKIE 142
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASDY---YNGCLFHRNIKGFIVQXXXXXXXXXXXX-S 285
G + + L+ + PK NF+AL + Y +FHR IK F++Q S
Sbjct: 40 GRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQGGDFTNKDGTGGYS 99
Query: 286 IWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGF 465
I+G F+ E LKH G MAN G NTNGSQF+IT + L +T +G+V++G
Sbjct: 100 IYGKYFDDE-NFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGM 158
Query: 466 EXLXDLQXMPVNPKSFXPLTEAKITSV 546
+ + ++ V+ PL E KIT +
Sbjct: 159 DVVRRIENTRVDTHD-KPLDEVKITGI 184
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 77.8 bits (183), Expect = 7e-15
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 EIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGR-VIDGFEXLXDL 483
++ HNARG SMANNGPN+NGSQFFI YG+QPHL +KYT++G+ +++ F L +L
Sbjct: 294 DLMGRCNHNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFGKYLLEVFSTLINL 352
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Frame = +1
Query: 85 ETMAVTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXX 264
E V L T +G+I+IEL ++ P + NFLA S YY G FHR I GF+VQ
Sbjct: 22 ENPKVLLTTSLGEIEIELDADKAPISTANFLAYVDSGYYAGTQFHRVIPGFMVQGGGFDA 81
Query: 265 XXXXXXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNG-SQFFITYGEQPHL-----H 426
+ K E D HN RG +MA + SQFFI + + L
Sbjct: 82 DMQQKDTQAPIKNEA---DNGLHNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRD 138
Query: 427 LKYTIYGRVIDGFEXLXDLQXMP 495
Y ++G+V+ G + + + +P
Sbjct: 139 FGYAVFGKVVKGMDVVDKIAQVP 161
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +1
Query: 328 KHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGFEXLXDLQXMPVNPK 507
+H+ G+ SMAN+GPNTNGSQFFIT PHL ++ ++G+V+ G + + +L+ PV+
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 508 S 510
S
Sbjct: 248 S 248
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 199 YNGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPN 375
Y +FHR I+ F++Q SI+G KF E +L+H G SMAN G +
Sbjct: 89 YKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADE-NFKLQHYGAGWLSMANAGKD 147
Query: 376 TNGSQFFITYGEQPHLHLKYTIYGRVIDGFE 468
TNGSQFFIT + P L ++ ++G+V+ G E
Sbjct: 148 TNGSQFFITTVKTPWLDGRHVVFGKVLKGME 178
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = +1
Query: 283 SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDG 462
S++G FE E + HN RGV MAN G +TNGSQF+IT P + KY +G+VI+G
Sbjct: 51 SVYGPLFEDE-DFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQVIEG 109
Query: 463 FEXLXDLQ 486
L L+
Sbjct: 110 LNVLDVLE 117
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1
Query: 97 VTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKG 234
V L T VGDI IEL+ ++ PKAC NF+ LC YY+ +FHR +KG
Sbjct: 6 VLLVTSVGDIDIELWGKETPKACRNFIQLCLEGYYDNTIFHRIVKG 51
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +1
Query: 283 SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDG 462
SI+G F E E KH + SMAN GPNTNGSQFFI +H+ ++G VI G
Sbjct: 31 SIYGGTFGDECF-EFKHERPMLLSMANRGPNTNGSQFFI-------IHV---VFGHVIQG 79
Query: 463 FEXLXDLQXMPVNPKSFXPLTEAKITS 543
E + ++ +P N K+ P + K+++
Sbjct: 80 EELVRQIESLPTNEKN-RPNADVKVSN 105
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +1
Query: 355 MANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGFEXLXDLQXMPVNPKSFXPLTEAK 534
MAN G +TNGSQFFIT + L K+ ++G+V++G + + L+ VN K P+
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLEN--VNVKGSTPVKTCM 58
Query: 535 I 537
I
Sbjct: 59 I 59
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 346 VXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGFEXLXDLQ 486
+ SMAN GP TNGSQFF+ + L K+ ++G V DG + + ++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKMR 48
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD-----------YYNGCLFHR 222
G + EL+ ++ PK NF ALC + +Y GC FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 164 HAFGHCSQYNSILISPTSVCKVTA 93
H FGHC Y+ + ++ TS+ + A
Sbjct: 383 HRFGHCCSYDDVEVADTSLAQEVA 406
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 223 SCGINNHYSNHLHIELENXHTLSDIARNIIQS*YLRRLCAK 101
+C + Y+N L IELE +D + + + YL ++C+K
Sbjct: 313 ACVDGDKYANDLGIELEEMKNSTDQSYDPLHDGYLCKICSK 353
>SB_21883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 300 FXSPNRRTAFPSSRGITSLYYKSL 229
F +P + FP+SRG+ SLY+ L
Sbjct: 6 FYAPAQWRVFPASRGLFSLYFAGL 29
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,848,926
Number of Sequences: 59808
Number of extensions: 327804
Number of successful extensions: 557
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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