Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_C23
(641 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 208 2e-54
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 149 1e-36
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 134 4e-32
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 134 6e-32
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 103 1e-22
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 99 2e-21
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 97 7e-21
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 94 6e-20
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 94 6e-20
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 89 2e-18
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 89 2e-18
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 89 3e-18
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 85 5e-17
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 81 5e-16
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 81 6e-16
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 80 1e-15
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 78 6e-15
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 77 1e-14
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 77 1e-14
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 74 7e-14
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 71 7e-13
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 61 7e-10
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 60 2e-09
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 60 2e-09
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 60 2e-09
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 58 4e-09
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 55 3e-08
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 32 0.28
At1g58060.1 68414.m06580 helicase domain-containing protein cont... 28 6.1
At4g17070.1 68417.m02573 expressed protein 27 8.0
At3g03380.1 68416.m00336 DegP protease, putative contains simila... 27 8.0
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 208 bits (509), Expect = 2e-54
Identities = 95/161 (59%), Positives = 118/161 (73%)
Frame = +1
Query: 91 MAVTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXX 270
M+VTLHT++GDIK E++C++ PK+ NFLALCAS YY+G +FHRNIKGF++Q
Sbjct: 1 MSVTLHTNLGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPKGTG 60
Query: 271 XXXXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGR 450
SIWG KF EI+D LKHNARG+ SMAN+GPNTNGSQFFITY +QPHL+ YTI+G+
Sbjct: 61 KGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGK 120
Query: 451 VIDGFEXLXDLQXMPVNPKSFXPLTEAKITSVTIHANPLAG 573
VI GFE L ++ P PL E ++ VTIHANPLAG
Sbjct: 121 VIHGFEVLDIMEKTQTGPGD-RPLAEIRLNRVTIHANPLAG 160
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 149 bits (362), Expect = 1e-36
Identities = 68/156 (43%), Positives = 95/156 (60%)
Frame = +1
Query: 97 VTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 276
V T GD+ IEL+C+ P+AC NF+ LC YYNG FHR+I+ F++Q
Sbjct: 346 VQFQTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKG 405
Query: 277 XXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVI 456
SIWG F+ E +L H+ RGV SMAN+GP+TNGSQFF+ Y HL+ K+T++G V+
Sbjct: 406 GESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVV 465
Query: 457 DGFEXLXDLQXMPVNPKSFXPLTEAKITSVTIHANP 564
G L ++ +PV+ +S PL E KI ++ NP
Sbjct: 466 GGLATLAAMENVPVD-ESDRPLEEIKIIEASVFVNP 500
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 134 bits (325), Expect = 4e-32
Identities = 69/147 (46%), Positives = 85/147 (57%)
Frame = +1
Query: 97 VTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 276
VTL T +G +E+Y + P+ C NFL L YY+ LFHR +K FIVQ
Sbjct: 12 VTLETSMGPFTVEMYYKHSPRTCRNFLELSRRGYYDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 277 XXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVI 456
SI+G KFE EI ELKH G+ SMAN GPNTNGSQFFIT QP L K+TI+GRV
Sbjct: 72 GESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVC 131
Query: 457 DGFEXLXDLQXMPVNPKSFXPLTEAKI 537
G E + L + + + P+ E KI
Sbjct: 132 RGMEVIKRLGSVQTD-NTDRPIHEVKI 157
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 134 bits (323), Expect = 6e-32
Identities = 64/152 (42%), Positives = 91/152 (59%)
Frame = +1
Query: 97 VTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 276
V +HT +GDI ++LY E+CPK NF C + YY+ LFHR I+GF++Q
Sbjct: 478 VIMHTTLGDIHMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGTG 537
Query: 277 XXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVI 456
SIWG +FE E L+H+ SMAN GPNTNGSQFFIT P L K+T++GRV+
Sbjct: 538 GQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVV 597
Query: 457 DGFEXLXDLQXMPVNPKSFXPLTEAKITSVTI 552
G + + ++ + + K+ P + KI +VT+
Sbjct: 598 KGMDVVQGIEKVKTD-KNDRPYQDVKILNVTV 628
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 103 bits (247), Expect = 1e-22
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Frame = +1
Query: 91 MAVTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXX 270
M+V + T +GDI I+L+ ++CP C NFL LC YYNGCLFH K F Q
Sbjct: 1 MSVLIVTSLGDIVIDLHSDKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTG 60
Query: 271 XXXXSI----WGXK---FEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQ-PHLH 426
SI +G + ++ EI +LKH+ G +MA+ G N N SQF+ T + +L
Sbjct: 61 AGGDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLD 120
Query: 427 LKYTIYGRVIDGFEXLXDLQXMPVNPKSFXPLTEAKITSVTIHANP 564
K+T++G++ +GF+ L + V+PK+ P +I I +P
Sbjct: 121 GKHTVFGQIAEGFDTLTRINEAYVDPKN-RPYKNIRIKHTHILDDP 165
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 99.1 bits (236), Expect = 2e-21
Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Frame = +1
Query: 97 VTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 276
V ++T G I +EL+ ++ PK+ NF+ LC Y++ +FHR I GF+VQ
Sbjct: 15 VIVNTTHGPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTGSGTG 74
Query: 277 XXSIWGXKFEXEIKDELKHNARGVXSMAN-NGPNTNGSQFFITYGEQPHLHLKYTIYGRV 453
SI+G F E L+ + RG+ +MAN + PN+NGSQFF T + L K+TI+G+V
Sbjct: 75 GDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
Query: 454 I-DGFEXLXDLQXMPVNPKSFXPLTEA-KITSVTIHANP 564
D L L + + K PL A KI SV + NP
Sbjct: 135 TGDSIYNLLRLGEVDTS-KDDRPLDPAPKILSVEVLWNP 172
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 97.5 bits (232), Expect = 7e-21
Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD-----------YYNGCLFHRNIKGFIVQXXXXXX 264
G I IELY + PK NF LC + +Y G FHR IKGF++Q
Sbjct: 18 GRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISA 77
Query: 265 XXXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTI 441
SI+G KF+ E ELKH +G+ SMAN+GPNTNGSQFFIT HL K+ +
Sbjct: 78 NDGTGGESIYGLKFDDE-NFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVV 136
Query: 442 YGRVIDGFEXLXDLQXMPVNPKS 510
+GRV G + ++ + + +S
Sbjct: 137 FGRVTKGMGVVRSIEHVSIEEQS 159
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 94.3 bits (224), Expect = 6e-20
Identities = 53/133 (39%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Frame = +1
Query: 124 IKIELYCEQCPKACXNFLALCASD-----------YYNGCLFHRNIKGFIVQXXXXXXXX 270
I IEL+ + PK NF ALC + ++ G FHR IKGF+ Q
Sbjct: 23 IVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGN 82
Query: 271 XXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYG 447
SI+G KF E L H+ GV SMAN GPNTNGSQFFI + QPHL K+ ++G
Sbjct: 83 GTGGESIYGGKFSDE-NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFG 141
Query: 448 RVIDGFEXLXDLQ 486
+V++G + ++
Sbjct: 142 KVVEGMAVIKKME 154
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 94.3 bits (224), Expect = 6e-20
Identities = 53/133 (39%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Frame = +1
Query: 124 IKIELYCEQCPKACXNFLALCASD-----------YYNGCLFHRNIKGFIVQXXXXXXXX 270
I IEL+ + PK NF ALC + ++ G FHR IKGF+ Q
Sbjct: 23 IVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGN 82
Query: 271 XXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYG 447
SI+G KF E L H+ GV SMAN GPNTNGSQFFI + QPHL K+ ++G
Sbjct: 83 GTGGESIYGGKFSDE-NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFG 141
Query: 448 RVIDGFEXLXDLQ 486
+V++G + ++
Sbjct: 142 KVVEGMAVIKKME 154
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 89.4 bits (212), Expect = 2e-18
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASDY---YNGCLFHRNIKGFIVQXXXXXXXXXXXX-S 285
G I + L+ E PK NF ALC + Y G FHR IK F++Q S
Sbjct: 109 GRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGIS 168
Query: 286 IWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGF 465
I+G KFE E LKH G+ SMAN GPNTNGSQFFI + L K+ ++G+VI+G
Sbjct: 169 IYGAKFEDE-NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGM 227
Query: 466 EXLXDLQ 486
+ + L+
Sbjct: 228 KLVRTLE 234
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 89.4 bits (212), Expect = 2e-18
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 267
G + +EL+ + P+ NF ALC + +Y G FHR I GF+ Q
Sbjct: 18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRG 77
Query: 268 XXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIY 444
SI+G KFE E +LKH G+ SMAN+GPNTNGSQFFI + L K+ ++
Sbjct: 78 NGTGGESIYGSKFEDE-NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVF 136
Query: 445 GRVIDGFEXLXDLQ 486
G+V+DG+ + ++
Sbjct: 137 GKVVDGYNVVKAME 150
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 88.6 bits (210), Expect = 3e-18
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASDY--------YNGCLFHRNIKGFIVQXXXXXXXXX 273
G IK+EL+ + PK NF C + Y C FHR IK F+VQ
Sbjct: 46 GRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDG 105
Query: 274 XXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGR 450
SI+G KFE E KH G+ SMAN+GPNTNG QFFIT + L K+ ++GR
Sbjct: 106 SGCMSIYGHKFEDE-NFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGR 164
Query: 451 VI-DGFEXLXDLQXMPVNPKS 510
V+ DG + ++ + + P +
Sbjct: 165 VLGDGLLVMRKIENVAIGPNN 185
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 84.6 bits (200), Expect = 5e-17
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Frame = +1
Query: 109 TDVGDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXX 258
T +G I++EL+ + P NF ALC + ++ G +FHR I GF+ Q
Sbjct: 15 TPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDF 74
Query: 259 XXXXXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKY 435
SI+G KF+ E + KH G+ SMAN+GPNTNGSQFFI + L K+
Sbjct: 75 TAKNGTGGESIYGAKFKDENFIK-KHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKH 133
Query: 436 TIYGRVIDGFEXLXDLQ 486
++G+V+ G + + ++
Sbjct: 134 VVFGQVVKGLDVVKAIE 150
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 81.4 bits (192), Expect = 5e-16
Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 267
G I +ELY ++ PK NF ALC + ++ G FHR I F+ Q
Sbjct: 19 GKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKG 78
Query: 268 XXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIY 444
SI+G KFE E E KH G+ SMAN G NTNGSQFFI + L K+ ++
Sbjct: 79 NGTGGESIYGAKFEDE-NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 137
Query: 445 GRVIDGFEXLXDLQ 486
G+V++G + + ++
Sbjct: 138 GQVVEGLDVVKAIE 151
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 81.0 bits (191), Expect = 6e-16
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASDY---YNGCLFHRNIKGFIVQXXXXXXXXXXXX-S 285
G I I LY + P+ NF ALC + Y G FHR I+ F++Q S
Sbjct: 107 GRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKS 166
Query: 286 IWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVIDGF 465
++G F+ E +L H GV SMAN GPNTNGSQFFI + L ++ ++G+VI+G
Sbjct: 167 VYGRTFKDE-NFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGM 225
Query: 466 E 468
E
Sbjct: 226 E 226
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 79.8 bits (188), Expect = 1e-15
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 267
G I +ELY ++ P+ NF ALC + ++ G FHR I F+ Q
Sbjct: 18 GRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAG 77
Query: 268 XXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIY 444
SI+G KFE E E KH G+ SMAN G NTNGSQFFI + L K+ ++
Sbjct: 78 NGTGGESIYGSKFEDE-NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 136
Query: 445 GRVIDGFEXLXDLQ 486
G+V++G + + ++
Sbjct: 137 GQVVEGLDVVKAIE 150
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 77.8 bits (183), Expect = 6e-15
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 267
G I +ELY + P+ NF ALC + +Y G FHR I F+ Q
Sbjct: 19 GRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAG 78
Query: 268 XXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIY 444
SI+G KF+ E + KH G+ SMAN G NTNGSQFFI + L K+ ++
Sbjct: 79 NGTGGESIYGSKFKDENFIK-KHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVF 137
Query: 445 GRVIDGFEXLXDLQ 486
G+V++G + D++
Sbjct: 138 GQVVEGLNVVRDIE 151
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 77.0 bits (181), Expect = 1e-14
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 267
G I I L+ PK NF +LC + Y+ G FHR I GF++Q
Sbjct: 73 GRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRG 132
Query: 268 XXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIY 444
SI+G KF E +LKH G SMAN+GP++NGSQFFIT L + ++
Sbjct: 133 DGRGGESIYGDKFADE-NFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVF 191
Query: 445 GRVIDGFEXLXDLQ 486
G+V+ G E + ++
Sbjct: 192 GKVLSGMEVVRKIE 205
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 77.0 bits (181), Expect = 1e-14
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 267
G + I L+ + PK NF ALC + +Y G FHR I F++Q
Sbjct: 46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHG 105
Query: 268 XXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIY 444
SI+G KF E +LKH GV SMAN+G +TNGSQFFIT L ++ ++
Sbjct: 106 NGMGGESIYGQKFADE-NFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVF 164
Query: 445 GRVIDGFEXLXDLQ 486
G+V+ G + + ++
Sbjct: 165 GKVVQGMDVVYKIE 178
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 74.1 bits (174), Expect = 7e-14
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Frame = +1
Query: 115 VGDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXX 264
+G I I LY PK NF ALC + +Y G FHR I GF++Q
Sbjct: 60 LGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIH 119
Query: 265 XXXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTI 441
SI+G F E +++H+ G+ +MAN GP++NGSQFFIT + L ++ +
Sbjct: 120 GDGKSSDSIYGGTFPDE-NFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVV 178
Query: 442 YGRVIDGFEXLXDLQ 486
G+VI G + + ++
Sbjct: 179 LGKVIQGMDNVFAIE 193
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 70.9 bits (166), Expect = 7e-13
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 267
G I + L+ + PK NF ALC + +Y G FHR I F++Q
Sbjct: 49 GRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHG 108
Query: 268 XXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKYTIY 444
SI+G KF E +LKH G SMAN G +TNGSQFFIT L ++ ++
Sbjct: 109 NGMGGESIYGEKFADE-NFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVF 167
Query: 445 GRVIDGFEXLXDLQ 486
G+V+ G + + ++
Sbjct: 168 GKVVTGMDVVYKVE 181
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 60.9 bits (141), Expect = 7e-10
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Frame = +1
Query: 100 TLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXXX 279
TL T G + IEL+ + P F+ C Y+ G LF R +K F++Q
Sbjct: 81 TLDTGKGSVTIELFKDTAPNVVDQFMKFCQDGYFKGFLFSRVVKHFVIQAGDSAEFDAVK 140
Query: 280 XSIWGXKFEXEIKDELKHNARGVXS-MANNGPNTNGSQFFITYGEQPHLHLKYTIYGRVI 456
W I LKH V + A N G +FFI + L+ K T++GRV
Sbjct: 141 D--WALD-RKNIDTSLKHEEFMVGTPKAKN--EQGGFEFFIVSAQIKDLNEKLTVFGRVS 195
Query: 457 DGFEXLXDLQXMPVNPKSFXPLTEAKITSVTI 552
G + + +++ + + + + P + +I SVT+
Sbjct: 196 KGQDVVQEIEEVETDDQ-YQPKSPIEIMSVTL 226
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/159 (26%), Positives = 71/159 (44%)
Frame = +1
Query: 76 YNLETMAVTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXX 255
Y+L A ++T G I +EL+ E P+ FL LC D++ G F R IK ++VQ
Sbjct: 77 YDLPGFA-DINTSKGLITVELFKEGSPEVVDKFLDLCQKDHFKGMPFQRVIKNYLVQAGH 135
Query: 256 XXXXXXXXXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKY 435
K + KH A + + N G N + IT P L+ +
Sbjct: 136 SPSSIPVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQL 194
Query: 436 TIYGRVIDGFEXLXDLQXMPVNPKSFXPLTEAKITSVTI 552
++GRV+ G + + +++ + + + F P + IT V +
Sbjct: 195 IVFGRVLKGEDVVQEIEEVDTD-EHFQPKSPIGITGVVL 232
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/159 (26%), Positives = 71/159 (44%)
Frame = +1
Query: 76 YNLETMAVTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXX 255
Y+L A ++T G I +EL+ E P+ FL LC D++ G F R IK ++VQ
Sbjct: 77 YDLPGFA-DINTSKGLITVELFKEGSPEVVDKFLDLCQKDHFKGMPFQRVIKNYLVQAGH 135
Query: 256 XXXXXXXXXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKY 435
K + KH A + + N G N + IT P L+ +
Sbjct: 136 SPSSIPVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQL 194
Query: 436 TIYGRVIDGFEXLXDLQXMPVNPKSFXPLTEAKITSVTI 552
++GRV+ G + + +++ + + + F P + IT V +
Sbjct: 195 IVFGRVLKGEDVVQEIEEVDTD-EHFQPKSPIGITGVVL 232
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/159 (26%), Positives = 71/159 (44%)
Frame = +1
Query: 76 YNLETMAVTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXX 255
Y+L A ++T G I +EL+ E P+ FL LC D++ G F R IK ++VQ
Sbjct: 77 YDLPGFA-DINTSKGLITVELFKEGSPEVVDKFLDLCQKDHFKGMPFQRVIKNYLVQAGH 135
Query: 256 XXXXXXXXXSIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGEQPHLHLKY 435
K + KH A + + N G N + IT P L+ +
Sbjct: 136 SPSSIPVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQL 194
Query: 436 TIYGRVIDGFEXLXDLQXMPVNPKSFXPLTEAKITSVTI 552
++GRV+ G + + +++ + + + F P + IT V +
Sbjct: 195 IVFGRVLKGEDVVQEIEEVDTD-EHFQPKSPIGITGVVL 232
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 58.4 bits (135), Expect = 4e-09
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Frame = +1
Query: 82 LETMAVTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHRNIKGFIVQXXXXX 261
L + V T GDI+ Y PK + L YN F R KGF+ Q
Sbjct: 29 LGSARVVFQTSYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVA 88
Query: 262 XXXXXXXSIWGXKFEXEIK-----DELKHNARGVXSMAN-NGPNTNGSQFFITYGEQPHL 423
+ K E E K ++KH RG SM + PN+ S F + G PHL
Sbjct: 89 SGRSAPMNEEQRK-EAEKKIVGEFSDVKH-VRGTLSMGRYDDPNSAQSSFSMLLGNAPHL 146
Query: 424 HLKYTIYGRVIDGFEXLXDLQXMPVNPKSFXPLTEAKITSVTIH 555
+Y ++G+V G E L L+ +P + + +IT ++ +
Sbjct: 147 DRQYAVFGKVTKGDETLSKLEEVPTRREGIFVMPTERITILSTY 190
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 55.2 bits (127), Expect = 3e-08
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Frame = +1
Query: 91 MAVTLHTDVGDIKI-ELYCEQCPKACXNFLALCASD-----------YYNGCLFHRNIKG 234
M V++ D + + EL+ E PK NF ALC + +Y G FHR +KG
Sbjct: 11 MDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKG 70
Query: 235 FIVQXXXXXXXXXXXX-SIWGXKFEXEIKDELKHNARGVXSMANNGPNTNGSQFFITYGE 411
Q SI+ KF E +L+H G+ SM+ + GS F IT+
Sbjct: 71 SSAQAGDFVNRNGTAGESIYAGKFPDE-SPKLRHEETGLLSMSIADRDKFGSHFHITFRP 129
Query: 412 QPHLHLKYTIYGRVIDGFEXLXDLQXMPVNPKSFXPLTEAKI 537
L ++G++I G E L ++ V + P KI
Sbjct: 130 NQQLDRNNVVFGKLIQGKEILKKIER--VGDEEGKPTVSVKI 169
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 32.3 bits (70), Expect = 0.28
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Frame = +1
Query: 118 GDIKIELYCEQCPKACXNFLALCASDYYNG-CLFHRNIKGFIVQXXXXXXXXXXXXSIWG 294
G I IEL+ + P+ NF LC + G C + KG I+
Sbjct: 18 GRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDLMWCGGDIIFE 77
Query: 295 XK--FEXEIKDE---LKH-NARGVXSMANNGPNTNGSQFFI---TYGEQPHLHLKYTIYG 447
+ E+ DE L H + G+ SMA ++NGSQF I YG Q + + + G
Sbjct: 78 NEPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQ--VDGDHVVIG 131
Query: 448 RVIDGFEXLXDLQ 486
+V++G + + +++
Sbjct: 132 KVVEGLDLMRNIE 144
>At1g58060.1 68414.m06580 helicase domain-containing protein
contains similarity to SP|P24785 Dosage compensation
regulator (Male-less protein) (No action potential
protein) {Drosophila melanogaster}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 1459
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +2
Query: 74 VIIWKQWQLLCT---QTSEISRLNYI 142
V+IWKQ +LLCT T E R N++
Sbjct: 509 VLIWKQEELLCTTIQSTEEDRRANFV 534
>At4g17070.1 68417.m02573 expressed protein
Length = 240
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 97 VTLHTDVGDIKIELYCEQCPKACXNFLALCASDYYNGCLFHR 222
V T+ G I ++L+ E P + L+L + GC FHR
Sbjct: 65 VGFETEHGVIHVKLHPECAPHSVYYILSLLTLRHCAGCQFHR 106
>At3g03380.1 68416.m00336 DegP protease, putative contains similarity
to degP GI:2623992 from [Bradyrhizobium japonicum]
Length = 1097
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 210 FIPQEYKGIYSTNW*SHGNWERRY 281
F+P+E G+Y T W HG+ RY
Sbjct: 994 FLPEEGHGVYVTRW-CHGSPAHRY 1016
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,527,163
Number of Sequences: 28952
Number of extensions: 225403
Number of successful extensions: 520
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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