SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C20
         (633 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B59EA Cluster: PREDICTED: similar to CG10117-PA...   189   4e-47
UniRef50_Q9V730 Cluster: Exostosin-1; n=4; Coelomata|Rep: Exosto...   167   1e-40
UniRef50_Q4RKJ6 Cluster: Chromosome 21 SCAF15029, whole genome s...   140   3e-32
UniRef50_A7SR92 Cluster: Predicted protein; n=1; Nematostella ve...   138   1e-31
UniRef50_Q16394 Cluster: Exostosin-1; n=44; Coelomata|Rep: Exost...   131   1e-29
UniRef50_O01704 Cluster: Multiple exostoses homolog 1; n=3; Caen...   110   2e-23
UniRef50_Q93063 Cluster: Exostosin-2; n=44; Eumetazoa|Rep: Exost...    83   7e-15
UniRef50_Q9Y169 Cluster: Exostosin-2; n=4; Diptera|Rep: Exostosi...    74   3e-12
UniRef50_Q92935 Cluster: Exostosin-like 1; n=17; Eutheria|Rep: E...    60   3e-08
UniRef50_O43909 Cluster: Exostosin-like 3; n=25; Deuterostomia|R...    58   2e-07
UniRef50_A7SS73 Cluster: Predicted protein; n=1; Nematostella ve...    55   2e-06
UniRef50_UPI0000EB3AB3 Cluster: UPI0000EB3AB3 related cluster; n...    45   0.002
UniRef50_Q5BZF5 Cluster: SJCHGC04148 protein; n=1; Schistosoma j...    42   0.009
UniRef50_UPI000155E51D Cluster: PREDICTED: similar to SP140 nucl...    33   4.3  
UniRef50_Q23CL9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_A6LIM8 Cluster: Putative uncharacterized protein; n=4; ...    32   10.0 
UniRef50_A0CQD9 Cluster: Chromosome undetermined scaffold_24, wh...    32   10.0 
UniRef50_A0C797 Cluster: Chromosome undetermined scaffold_154, w...    32   10.0 

>UniRef50_UPI00015B59EA Cluster: PREDICTED: similar to CG10117-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG10117-PA - Nasonia vitripennis
          Length = 703

 Score =  189 bits (461), Expect = 4e-47
 Identities = 92/186 (49%), Positives = 124/186 (66%), Gaps = 10/186 (5%)
 Frame = +3

Query: 105 MQAKRRYLLLFMSCAFLLYCYYGNTSFKSDTCKSKLN---ELPSFATLD----DLHLKPS 263
           MQAK+RYLLLF++CAFL +CY+G    K+ +   K     +LPS+  LD    + + K S
Sbjct: 1   MQAKKRYLLLFVTCAFLGFCYFGGYRLKAKSSSKKKTAQEDLPSYYALDPNYQENYEKWS 60

Query: 264 RQKRN-PASAT--QPCRMDTCFDFSKCGSDPKIFVYPSDGTVSASYXKVLSVIXXSTYVT 434
           ++  N P S    + C M TCFDF+KC     ++VYP + T+S  Y K+L+VI  S Y T
Sbjct: 61  KELNNQPPSPPNLKKCDMKTCFDFTKCKEGFTVYVYPIEDTISPLYQKILNVITESRYYT 120

Query: 435 XDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYWXNGXNHLIFNLYAGTWPDYAE 614
            DP+  CLFV A+DTLD DPLS+  V ++ S+++ LPYW NG NHLIFNLY+GTWPDY E
Sbjct: 121 SDPSRACLFVLALDTLDRDPLSTEFVHNLPSKVARLPYWNNGKNHLIFNLYSGTWPDYIE 180

Query: 615 DSLGFD 632
           D++ FD
Sbjct: 181 DAMAFD 186


>UniRef50_Q9V730 Cluster: Exostosin-1; n=4; Coelomata|Rep:
           Exostosin-1 - Drosophila melanogaster (Fruit fly)
          Length = 760

 Score =  167 bits (407), Expect = 1e-40
 Identities = 91/207 (43%), Positives = 120/207 (57%), Gaps = 31/207 (14%)
 Frame = +3

Query: 105 MQAKRRYLLLFMSCAFLLYCYYGNTSFKSDTCKSKL--------------NELPSFA--- 233
           MQAK+RY+L+F+SCAFL Y Y+G    K    + +                +LPSF    
Sbjct: 1   MQAKKRYILVFVSCAFLAYAYFGGYRLKVSPLRPRRAQHESAKDGGVQPHEQLPSFLGAH 60

Query: 234 TLDDLHLKPSRQKRNPASATQ------PCRMDTCFDFSKCGSDPKIFVYPSDGT------ 377
            + +L L  S Q ++  S+         CRM+TCFDF++C     +++YP +        
Sbjct: 61  DMQELQLLQSNQSKSLDSSKHLVTRKPDCRMETCFDFTRCYDRFLVYIYPPEPLNSLGAA 120

Query: 378 --VSASYXKVLSVIXXSTYVTXDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYW 551
              SA+Y K+L+ I  S Y T DP   CLFV  IDTLD D LS  +V +V SRL+ LPYW
Sbjct: 121 PPTSANYQKILTAIQESRYYTSDPTAACLFVLGIDTLDRDSLSEDYVRNVPSRLARLPYW 180

Query: 552 XNGXNHLIFNLYAGTWPDYAEDSLGFD 632
            NG NH+IFNLY+GTWPDYAE+SLGFD
Sbjct: 181 NNGRNHIIFNLYSGTWPDYAENSLGFD 207


>UniRef50_Q4RKJ6 Cluster: Chromosome 21 SCAF15029, whole genome
           shotgun sequence; n=13; Deuterostomia|Rep: Chromosome 21
           SCAF15029, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1040

 Score =  140 bits (338), Expect = 3e-32
 Identities = 87/206 (42%), Positives = 118/206 (57%), Gaps = 30/206 (14%)
 Frame = +3

Query: 105 MQAKRRYLLLFM-SCAFLLYCYYGN----------TSFKSDTCKSKLNE-----LPSFAT 236
           MQA+++Y+LL + +C +LL  Y+G           T  + +  +   N      LP +A 
Sbjct: 1   MQARKKYVLLGLCACCWLLLFYWGGGVQLRVFRMLTRQRGEVVRPWPNWTDRAFLPRYAH 60

Query: 237 LDDLHLKP-----SRQKRNPASATQP---CRMDTCFDFSKC---GSDP-KIFVYPSDGT- 377
           LD+L   P     S Q+R   S       CRM+TCFDFS+C   G +  ++++YPSD   
Sbjct: 61  LDELQTDPGMPESSGQRRQAWSTVYKDSRCRMETCFDFSRCRRRGREGFRVYIYPSDKND 120

Query: 378 -VSASYXKVLSVIXXSTYVTXDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYWX 554
            +S SY K+L+ I  S Y T DP+E CLFV  IDTLD D LS   V +V  R+   P W 
Sbjct: 121 RMSESYRKILTSISESRYYTSDPHEACLFVLGIDTLDRDQLSGQFVPNVDERIRGYPLWN 180

Query: 555 NGXNHLIFNLYAGTWPDYAEDSLGFD 632
           +G NHLIFNLY+GTWP+Y ED LGF+
Sbjct: 181 DGRNHLIFNLYSGTWPNYTED-LGFN 205


>UniRef50_A7SR92 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 728

 Score =  138 bits (334), Expect = 1e-31
 Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
 Frame = +3

Query: 255 KPSRQKRNPASATQPCRMDTCFDFSKCGSDPKIFVYP--SDGTVSASYXKVLSVIXXSTY 428
           K S   +N       C M+TCFD +KC SD +I+VYP      +S +Y  ++ VI  S Y
Sbjct: 71  KDSISSKNVPPQPNKCTMETCFDKTKCLSDFRIYVYPVHPGAKLSTTYTNIIKVIKESRY 130

Query: 429 VTXDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYWXNGXNHLIFNLYAGTWPDY 608
            T  P E CLF+ AIDTLD D LS+ +V ++ +++  LPYW NG NH+IFNL+AGTWPDY
Sbjct: 131 YTEFPEEACLFITAIDTLDRDKLSADYVHNIYNKIRQLPYWKNGENHIIFNLFAGTWPDY 190

Query: 609 AEDSLGFD 632
           +ED +GFD
Sbjct: 191 SED-VGFD 197


>UniRef50_Q16394 Cluster: Exostosin-1; n=44; Coelomata|Rep:
           Exostosin-1 - Homo sapiens (Human)
          Length = 746

 Score =  131 bits (317), Expect = 1e-29
 Identities = 83/213 (38%), Positives = 116/213 (54%), Gaps = 37/213 (17%)
 Frame = +3

Query: 105 MQAKRRYLLLFM--SCAFLLYCYYGNTSFKSDTCKSKLNE-------------------- 218
           MQAK+RY +L    SC  LL+ Y+G   F++    S+  E                    
Sbjct: 1   MQAKKRYFILLSAGSCLALLF-YFGGLQFRASRSHSRREEHSGRNGLHHPSPDHFWPRFP 59

Query: 219 --LPSFATLDDL-------HLKPSRQKRNPASAT---QPCRMDTCFDFSKCGSDP-KIFV 359
             L  F   D L       H+ P RQKR+  S+    + CRM++CFDF+ C  +  K++V
Sbjct: 60  DALRPFVPWDQLENEDSSVHISP-RQKRDANSSIYKGKKCRMESCFDFTLCKKNGFKVYV 118

Query: 360 YPSD--GTVSASYXKVLSVIXXSTYVTXDPNEXCLFVPAIDTLDADPLSSXHVSDVASRL 533
           YP      ++ SY  +L+ I  S + T DP++ CLFV ++DTLD D LS  +V ++ S++
Sbjct: 119 YPQQKGEKIAESYQNILAAIEGSRFYTSDPSQACLFVLSLDTLDRDQLSPQYVHNLRSKV 178

Query: 534 SXLPYWXNGXNHLIFNLYAGTWPDYAEDSLGFD 632
             L  W NG NHLIFNLY+GTWPDY ED +GFD
Sbjct: 179 QSLHLWNNGRNHLIFNLYSGTWPDYTED-VGFD 210


>UniRef50_O01704 Cluster: Multiple exostoses homolog 1; n=3;
           Caenorhabditis|Rep: Multiple exostoses homolog 1 -
           Caenorhabditis elegans
          Length = 378

 Score =  110 bits (265), Expect = 2e-23
 Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
 Frame = +3

Query: 273 RNPASATQPCRMDTCFDFSKCGSDPKIFVYP-----SDGTVSASYXKVLSVIXXSTYVTX 437
           +NP    + C M  CFDFSKC +  K++++P      +   S  Y K+L     S + T 
Sbjct: 17  QNPTIERKQCTMSNCFDFSKCSTSKKVYIHPMEKRFEESPQSVIYSKILKHFLESNHYTN 76

Query: 438 DPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLP--YWXNGXNHLIFNLYAGTWPDYA 611
           DPNE C+F+  IDT D D  S  +V +V   +  L    W NG NHLIFN Y GT+PDY 
Sbjct: 77  DPNEACIFLLGIDTTDRDVRSQNYVKNVNDYIESLDPSVWNNGRNHLIFNFYHGTFPDYD 136

Query: 612 EDSLGFD 632
           + +L FD
Sbjct: 137 DHNLNFD 143


>UniRef50_Q93063 Cluster: Exostosin-2; n=44; Eumetazoa|Rep:
           Exostosin-2 - Homo sapiens (Human)
          Length = 718

 Score = 82.6 bits (195), Expect = 7e-15
 Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
 Frame = +3

Query: 279 PASATQPCRMDTCFDFSKCGSDPK----IFVYPS-----------DGTVSASYXKVLSVI 413
           P      CRM TCFD  +CG +PK    +++Y               T+S  Y ++L  I
Sbjct: 78  PERGDLSCRMHTCFDVYRCGFNPKNKIKVYIYALKKYVDDFGVSVSNTISREYNELLMAI 137

Query: 414 XXSTYVTXDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYWXNGXNHLIFNLYAG 593
             S Y T D N  CLFVP+ID L+ + L    + + A  ++ L  W  G NHL+FN+  G
Sbjct: 138 SDSDYYTDDINRACLFVPSIDVLNQNTL---RIKETAQAMAQLSRWDRGTNHLLFNMLPG 194

Query: 594 TWPDY 608
             PDY
Sbjct: 195 GPPDY 199


>UniRef50_Q9Y169 Cluster: Exostosin-2; n=4; Diptera|Rep: Exostosin-2
           - Drosophila melanogaster (Fruit fly)
          Length = 717

 Score = 73.7 bits (173), Expect = 3e-12
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
 Frame = +3

Query: 237 LDDLHLKPSRQKRNPASATQPCRMDTCFDFSKCGSDP-KIFVYP--------SDGT---V 380
           + +L + P  ++R   +    C    C +  KC  D  K+++YP        SD T   +
Sbjct: 74  IQELAVNPEAEQR---ARNVNCTFWDCLNIYKCEHDRLKVYIYPLQEFVDEQSDKTATTL 130

Query: 381 SASYXKVLSVIXXSTYVTXDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYWXNG 560
           S+ Y ++L  +  S Y T +PNE CLF+P++D L+ + +   H++  A  L+ L +W  G
Sbjct: 131 SSEYFQILEAVLKSRYYTSNPNEACLFLPSLDLLNQN-VFDKHLAGAA--LASLDFWDRG 187

Query: 561 XNHLIFNLYAGTWPDY 608
            NH+IFN+  G  P Y
Sbjct: 188 ANHIIFNMLPGGAPSY 203


>UniRef50_Q92935 Cluster: Exostosin-like 1; n=17; Eutheria|Rep:
           Exostosin-like 1 - Homo sapiens (Human)
          Length = 676

 Score = 60.5 bits (140), Expect = 3e-08
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
 Frame = +3

Query: 300 CRMDTCFDFSKCGSDP-KIFVYPSDGTVSASYXKVLSVIXXSTYVTXDPNEXCLFVPAID 476
           C  ++CFD SKC  D  K+FVYP+ GT+S ++ ++L+ I  S + T  P   CL +  + 
Sbjct: 80  CNWESCFDTSKCRGDGLKVFVYPAVGTISETHRRILASIEGSRFYTFSPAGACLLL--LL 137

Query: 477 TLDADPLSSXHVSDVASRLSXLP-YWXNGXNHLIFNLYAGTWP 602
           +LDA               S +P  W  G NHL+  L+    P
Sbjct: 138 SLDAQ----------TGECSSMPLQWNRGRNHLVLRLHPAPCP 170


>UniRef50_O43909 Cluster: Exostosin-like 3; n=25; Deuterostomia|Rep:
           Exostosin-like 3 - Homo sapiens (Human)
          Length = 919

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
 Frame = +3

Query: 279 PASATQPCRMDTCFDFSKC--GSDPKIFVYPSDGTVSASYXKVL------SVIXXSTYVT 434
           P  AT+ CR+  CFD+S+C   S   ++VY SD  V  SY   L      +    + YVT
Sbjct: 170 PPKATRGCRLHNCFDYSRCPLTSGFPVYVYDSDQFVFGSYLDPLVKQAFQATARANVYVT 229

Query: 435 XDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYW-XNGXNHLIFNL 584
            + +  CL+V  +  +  +P+     +++  +L  LP+W  +G NH+I NL
Sbjct: 230 ENADIACLYVILVGEMQ-EPV-VLRPAELEKQLYSLPHWRTDGHNHVIINL 278


>UniRef50_A7SS73 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 881

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
 Frame = +3

Query: 282 ASATQPCRMDTCFDFSKC--GSDPKIFVY-PSDGTVSAS---YXKVLSVIXXSTYVTXDP 443
           A  +  C +D CFDFSKC  G+   I+VY P   T+        ++  ++  + Y T   
Sbjct: 171 ADDSASCNIDDCFDFSKCSYGAGFSIYVYNPEKYTIGERTDLVFEIYGILQKTAYYTERE 230

Query: 444 NEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYW-XNGXNHLIFNL 584
            + C F+  I +L +   SS H   +  +L  LP+W  NG NH++  L
Sbjct: 231 EDACSFIVLIGSLGS---SSSHF--IREQLQSLPHWGKNGSNHILLKL 273


>UniRef50_UPI0000EB3AB3 Cluster: UPI0000EB3AB3 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB3AB3 UniRef100
           entry - Canis familiaris
          Length = 636

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
 Frame = +3

Query: 300 CRMDTCFDFSKC-GSDPKIFVYPSDGTVSASYXKVLSVIXXSTYVTXDPNEXCLFVPAID 476
           C    CF+ SKC G   K+FV P  G +S +   +L+ I  S+Y +  P+E CL +    
Sbjct: 79  CDWGACFNVSKCRGGGLKVFVSPVAGPISDTQRGILASIESSSYHSVSPDEACLLL---- 134

Query: 477 TLDADPLSSXHVSDVASRLSXLP-YWXNGXNHLIFNLYAGTWP 602
            L   P +       A   S +P  W  G N L+ +L+    P
Sbjct: 135 -LLLGPEAP------AGECSPVPQQWNGGKNQLVLSLHPALCP 170


>UniRef50_Q5BZF5 Cluster: SJCHGC04148 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04148 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 234

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = +3

Query: 381 SASYXKVLSVIXXSTYVTXDPNEXCLFVPAIDTLDADPLSSXHVSDVASRLSXLPYWXNG 560
           S  +  + + I  S Y      E C+ VP +D L   P  S  +      L+ LP W  G
Sbjct: 34  SQQFISLYNAILSSKYYVNRIEEACIIVPIVDLLYPYPNDSQMIDLSMRYLNHLPSWNEG 93

Query: 561 XNHLIFN 581
            NHL+ N
Sbjct: 94  KNHLLIN 100


>UniRef50_UPI000155E51D Cluster: PREDICTED: similar to SP140 nuclear
           body protein; n=1; Equus caballus|Rep: PREDICTED:
           similar to SP140 nuclear body protein - Equus caballus
          Length = 822

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 21/66 (31%), Positives = 28/66 (42%)
 Frame = +3

Query: 162 CYYGNTSFKSDTCKSKLNELPSFATLDDLHLKPSRQKRNPASATQPCRMDTCFDFSKCGS 341
           C  G   F  DTC    +E        D H+ P   +RNP S T  CRM       +C  
Sbjct: 648 CRDGGWLFCCDTCSRSFHE--------DCHIPPVETQRNPWSCTF-CRMKESSGSQQCHG 698

Query: 342 DPKIFV 359
           +P++ V
Sbjct: 699 EPEVLV 704


>UniRef50_Q23CL9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 50

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +1

Query: 223 HLLQHLMICTLNHLDKNAILLLQHSLVVWIHVSTFLNVEVIQKFLCTQV 369
           H +++  ICT+   +K  ILLL H L + + +  F + +++Q FL  ++
Sbjct: 3   HKVKNCHICTIQEKEKMVILLLYHHLNLGL-IDIFFDFQILQFFLIKKI 50


>UniRef50_A6LIM8 Cluster: Putative uncharacterized protein; n=4;
           Bacteroidales|Rep: Putative uncharacterized protein -
           Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
           / NCTC11152)
          Length = 136

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 58  LFGVKQILVFISTVVKCKRNDDTYYFSCL-VLFFCIATTEILVSSQTL 198
           L G++ +   I T++ CKRND   + SCL  LF  +A+   +V+   L
Sbjct: 16  LLGIEFLRSDIQTILYCKRNDPGIFKSCLYTLFILLASLYSIVAGAML 63


>UniRef50_A0CQD9 Cluster: Chromosome undetermined scaffold_24, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_24,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 274

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 159 YCYYGNTSFKSDTCKSKLNELPSFATLDDLHLKPSRQKRNPASATQP 299
           Y   GN     D  K +L  L  F  LDD++L  +  K+N  SA  P
Sbjct: 136 YICLGNFDKLIDFLKKELQNLSMFIVLDDINLNVNANKQNEHSAQDP 182


>UniRef50_A0C797 Cluster: Chromosome undetermined scaffold_154, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_154, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2299

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 99   CEMQAKRRYLLLFMSCAFLLYCYYGNTSFKSDTCKSKLNEL 221
            C+ +++ ++ L   SC  L YCY+  T  K + C +   +L
Sbjct: 1027 CQNKSECKFQLNLTSCQSLTYCYWDTTLCKQNVCSTATTQL 1067


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,212,193
Number of Sequences: 1657284
Number of extensions: 10722766
Number of successful extensions: 26074
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 25324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26048
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -