Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C20
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    25   0.69 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.8  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.6  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 117 VSLAFHNRRNKYQNLFHPKQVS 52
           V + F NRR+KY+ +    QVS
Sbjct: 165 VKIWFQNRRSKYKKMMKAAQVS 186


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 73  QILVFISTVVKCKRNDDTYYFSCLVLFFCIATTEILVSSQTLVN 204
           Q+ +  S V KC      YYF C+ + F +    +L S    V+
Sbjct: 39  QVGILDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVH 82


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = +1

Query: 238 LMICTLNHLDKNAILLLQHSLVVWIHVSTFLNVEVIQKFLC 360
           +   TL+ LD    ++ + + V ++H++    + V + F+C
Sbjct: 226 IFFATLDFLDNVDTIMYEKTNVTFVHLAVLNILRVGKNFVC 266


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 561 YHXSNKVXSIDVKRHQIHVXMTRGQHPVY 475
           Y+  N   S +   HQ +V   +G+HP Y
Sbjct: 360 YYNKNHPNSENYINHQNYVQGYQGEHPNY 388


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 561 YHXSNKVXSIDVKRHQIHVXMTRGQHPVY 475
           Y+  N   S +   HQ +V   +G+HP Y
Sbjct: 308 YYNKNHPNSENYINHQNYVQGYQGEHPNY 336


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 195 TCKSKLNELPSFATLDDLHLKPS 263
           T  S  + +PS +T DDL   P+
Sbjct: 124 TVSSSTSSIPSPSTTDDLSTNPT 146


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 114 SLAFHNRRNKYQNLFHPKQVSNC*KLLNE 28
           S  F N R++Y   F P+  S   K  N+
Sbjct: 391 SSTFRNNRDEYNVCFRPRNNSILIKNFND 419


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 348 KIFVYPSDGTVSASYXKVL 404
           KIF  P D  +  SY K+L
Sbjct: 6   KIFPVPGDKNLHKSYSKML 24


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 348 KIFVYPSDGTVSASYXKVL 404
           KIF  P D  +  SY K+L
Sbjct: 6   KIFPVPGDKNLHKSYSKML 24


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 183 FKSDTCKSKLNELPSFATLDDLH 251
           F +DT K +L +L     L D H
Sbjct: 179 FVTDTLKKELEKLQKIVYLRDYH 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,550
Number of Sequences: 336
Number of extensions: 3110
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)