Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_C17
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 338 3e-94
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 338 4e-94
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 338 4e-94
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 188 8e-49
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 184 1e-47
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 105 4e-24
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 53 3e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 42 6e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 41 2e-04
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 39 7e-04
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 39 7e-04
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 38 0.001
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 30 0.34
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 1.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 2.4
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 2.4
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 25 7.2
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 338 bits (832), Expect = 3e-94
Identities = 160/196 (81%), Positives = 175/196 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGT 423
DKLKAERERGITIDIALWKFET KY VT+IDAP HR FIKNMITGTSQADCAVLI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120
Query: 424 GEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
GEFE GIS +GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKK 178
Query: 604 IGYNPAAVAFVPISGW 651
+G+NP V FVP+SG+
Sbjct: 179 VGFNPKTVPFVPVSGF 194
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 338 bits (831), Expect = 4e-94
Identities = 159/196 (81%), Positives = 175/196 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGT 423
DKLKAERERGITIDIALWKFET KY VT+IDAP HR FIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 424 GEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
GEFE GIS +GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKK 178
Query: 604 IGYNPAAVAFVPISGW 651
+G+NP V FVP+SG+
Sbjct: 179 VGFNPKTVPFVPVSGF 194
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 338 bits (831), Expect = 4e-94
Identities = 159/196 (81%), Positives = 175/196 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGT 423
DKLKAERERGITIDIALWKFET KY VT+IDAP HR FIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 424 GEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
GEFE GIS +GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKK 178
Query: 604 IGYNPAAVAFVPISGW 651
+G+NP V FVP+SG+
Sbjct: 179 VGFNPKTVPFVPVSGF 194
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 188 bits (457), Expect = 8e-49
Identities = 87/194 (44%), Positives = 128/194 (65%), Gaps = 2/194 (1%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLK 255
K H+NIV IGHVD+GKST G++++ G +DKRT+ K E+EA E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 256 AERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFE 435
ERE+G T+++ FET +++DAP H+ ++ NMI G SQAD VL++ A GEFE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355
Query: 436 XGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKKI-GY 612
G GQTREHA+LA T G+ L+V +NKMD +SE R++E ++S +++++ GY
Sbjct: 356 AGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGY 415
Query: 613 NPAA-VAFVPISGW 651
N V ++P+S +
Sbjct: 416 NSKTDVKYMPVSAY 429
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 184 bits (448), Expect = 1e-47
Identities = 93/191 (48%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLK 255
K +++VV GHVDSGKST G ++++ G I+ R++ K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 256 AERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFE 435
ER RG+T+D+A FE+ K I DAP HR FI MI G S AD AVL+V + FE
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294
Query: 436 XGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSY-IKKIGY 612
G NGQTREHA L LG+ +++V VNK+D +SE RF+EI VS + IK +G+
Sbjct: 295 RGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGF 352
Query: 613 NPAAVAFVPIS 645
+ V FVPIS
Sbjct: 353 KTSNVHFVPIS 363
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 105 bits (253), Expect = 4e-24
Identities = 67/175 (38%), Positives = 94/175 (53%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDK 249
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGE 429
E+ RGITI A ++ET + +D P H +IKNMITG + D A+++V A G+
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153
Query: 430 FEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSY 594
QTREH LLA +GVKQ++V +NK+D EP E E+ + +S Y
Sbjct: 154 MP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 53.2 bits (122), Expect = 3e-08
Identities = 45/148 (30%), Positives = 65/148 (43%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 268 RGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFEXGIS 447
RGITI+ A F + +ID P H F + + D AV I+ G
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG------- 129
Query: 448 XNGQTREHALLAFTLGVKQLIVGVNKMD 531
QT+ A G+ ++I VNKMD
Sbjct: 130 VEAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 42.3 bits (95), Expect = 6e-05
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 268 RGITIDI----ALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFE 435
RGIT+ ++ + Y + +ID P H F ++ + + +L+V A G
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG--- 160
Query: 436 XGISXNGQTREHALLAFTLGVKQLIVGVNKMD 531
QT + +AF+ + +I +NK+D
Sbjct: 161 ----IQAQTLSNFYMAFSQNL-VIIPVLNKVD 187
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 40.7 bits (91), Expect = 2e-04
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 19/147 (12%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 268 RGITIDIA----LWK---------------FETXKYYVTIIDAPXHRXFIKNMITGTSQA 390
+GITI A W+ FE Y + IID P H F +
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFE-KSYNINIIDTPGHIDFTIEVERALRVL 169
Query: 391 DCAVLIVXAGTGEFEXGISXNGQTREH 471
D AVL++ A +G I+ + Q R +
Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 38.7 bits (86), Expect = 7e-04
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIXKF-EKEAXEMGKGSFKYA 234
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 235 WVLDKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIV 411
+ L AE D+ + + V +ID+P H F + D A+++V
Sbjct: 73 TAIS-LFAEMTDDDMKDMKE-PADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 38.7 bits (86), Expect = 7e-04
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIXKF-EKEAXEMGKGSFKYA 234
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 235 WVLDKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIV 411
+ L AE D+ + + V +ID+P H F + D A+++V
Sbjct: 73 TAIS-LFAEMTDDDMKDMKE-PADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +1
Query: 319 YVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
+V+ +D P H + M+ G + D A+L++ AG QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLI-AGNES-----CPQPQTSEHLAAIEIMQL 162
Query: 499 KQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYI 597
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 281 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMVRLSIPPH 153
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 305 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMV 174
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.1 bits (57), Expect = 2.4
Identities = 24/105 (22%), Positives = 44/105 (41%)
Frame = +1
Query: 97 VIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGI 276
++GHVD+GK+ +L + + + ++ +G F + K K ++G
Sbjct: 489 ILGHVDTGKTKLLDNL--RRSNVQEGEAGGITQQ---IGATYFPIESIKQKTKVVNKKG- 542
Query: 277 TIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIV 411
K + + IID P H F GTS + A+L++
Sbjct: 543 -------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 27.1 bits (57), Expect = 2.4
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIXKFEKEAXEMGKGSFKYAWVLDKLKA 258
N ++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74
Query: 259 ERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTG 426
I K Y + +ID+P H F + + + D A ++V A G
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 548 TVSPDLRKSXRKYPHTSRRLATTQLLSLSC 637
+ +PD+ ++PHT +R +T + L + C
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRC 174
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,396,736
Number of Sequences: 5004
Number of extensions: 42643
Number of successful extensions: 145
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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