Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_C17
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 359 e-100
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 359 e-100
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 233 5e-79
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 287 4e-78
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 207 5e-54
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 207 5e-54
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 202 2e-52
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 134 7e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 87 1e-17
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 87 1e-17
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 87 1e-17
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 85 3e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 85 3e-17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 51 8e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.005
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 37 0.014
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 36 0.019
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 36 0.019
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 34 0.077
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 33 0.18
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 32 0.41
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.94
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.94
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 31 0.94
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 2.2
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 5.0
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 5.0
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 359 bits (884), Expect = e-100
Identities = 171/196 (87%), Positives = 176/196 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGT 423
DKLKAERERGITIDIALWKFET KYY+TIIDAP HR FIKNMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 424 GEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
GEFE GIS NGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 604 IGYNPAAVAFVPISGW 651
IGYNP AV FVPISG+
Sbjct: 181 IGYNPKAVPFVPISGF 196
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 359 bits (884), Expect = e-100
Identities = 171/196 (87%), Positives = 176/196 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGT 423
DKLKAERERGITIDIALWKFET KYY+TIIDAP HR FIKNMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 424 GEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
GEFE GIS NGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 604 IGYNPAAVAFVPISGW 651
IGYNP AV FVPISG+
Sbjct: 181 IGYNPKAVPFVPISGF 196
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 233 bits (570), Expect(2) = 5e-79
Identities = 108/116 (93%), Positives = 110/116 (94%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIV 411
DKLKAERERGITIDIALWKFET KYY+TIIDAP HR FIKNMITGTSQADCAVL+V
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Score = 79.4 bits (187), Expect(2) = 5e-79
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +1
Query: 505 LIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKKIGYNPAAVAFVPISGW 651
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 162
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 287 bits (705), Expect = 4e-78
Identities = 141/172 (81%), Positives = 146/172 (84%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGT 423
DKLKAERERGITIDIALWKFET KYY+TIIDAP HR FIKNMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 424 GEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXK 579
GEFE GIS NGQTREHALLA TLGVKQL V+ T P S R + I +
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 207 bits (506), Expect = 5e-54
Identities = 101/194 (52%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKL 252
+K IN++V+GHVD+GKST GHL++ +D RTI KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 253 KAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEF 432
+ ERERG+T+DI FET + ++DAP H+ FI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 433 EXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYI-KKIG 609
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EI +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 610 YNPAAVAFVPISGW 651
++ FVP+SG+
Sbjct: 345 FSKP--KFVPVSGF 356
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 207 bits (506), Expect = 5e-54
Identities = 101/194 (52%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKL 252
+K IN++V+GHVD+GKST GHL++ +D RTI KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 253 KAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEF 432
+ ERERG+T+DI FET + ++DAP H+ FI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 433 EXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYI-KKIG 609
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EI +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 610 YNPAAVAFVPISGW 651
++ FVP+SG+
Sbjct: 363 FSKP--KFVPVSGF 374
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 202 bits (492), Expect = 2e-52
Identities = 92/195 (47%), Positives = 132/195 (67%), Gaps = 1/195 (0%)
Frame = +1
Query: 67 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLD 246
G K HIN+V +GHVD+GKST G L++ G +DKRT+ K+E+EA E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 247 KLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTG 426
ERE+G T+++ FET K + TI+DAP H+ F+ NMI G +QAD AVL++ A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 427 EFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKKI 606
EFE G GQTREH++L T GVK L++ VNKMD + E RF+EI +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 607 GYNPAA-VAFVPISG 648
G+NP + +VP SG
Sbjct: 284 GFNPKTDITYVPCSG 298
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 134 bits (323), Expect = 7e-32
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAER 264
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 86.6 bits (205), Expect = 1e-17
Identities = 66/183 (36%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 89
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGE 429
E+ RGITI+ ++ET K + ID P H +IKNMITG +Q + A+L+V A G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 430 FEXGISXNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
QTREH LLA +GV ++V +NK+D E P +E R E + ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 604 IGY 612
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 86.6 bits (205), Expect = 1e-17
Identities = 66/183 (36%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 90
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGE 429
E+ RGITI+ ++ET K + ID P H +IKNMITG +Q + A+L+V A G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 430 FEXGISXNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
QTREH LLA +GV ++V +NK+D E P +E R E + ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 604 IGY 612
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 86.6 bits (205), Expect = 1e-17
Identities = 66/183 (36%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 90
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGE 429
E+ RGITI+ ++ET K + ID P H +IKNMITG +Q + A+L+V A G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 430 FEXGISXNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKK 603
QTREH LLA +GV ++V +NK+D E P +E R E + ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 604 IGY 612
GY
Sbjct: 201 FGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 85.4 bits (202), Expect = 3e-17
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDK 249
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGE 429
K E++RGITI++A +E+ + D P H FIKNMI GTSQ D AVL++ A G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 430 FEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKKIG 609
E QT+EH +LA +GVK + + +NK D E E + + E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 610 YNPAAVAFV 636
+N A +
Sbjct: 195 FNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 85.4 bits (202), Expect = 3e-17
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDK 249
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 250 LKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGE 429
K E++RGITI++A +E+ + D P H FIKNMI GTSQ D AVL++ A G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 430 FEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKKIG 609
E QT+EH +LA +GVK + + +NK D E E + + E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 610 YNPAAVAFV 636
+N A +
Sbjct: 195 FNGDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/148 (29%), Positives = 64/148 (43%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 268 RGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFEXGIS 447
RGIT+ Y + +ID P H F + + D +L+V A G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 448 XNGQTREHALLAFTLGVKQLIVGVNKMD 531
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 50.8 bits (116), Expect = 8e-07
Identities = 37/113 (32%), Positives = 51/113 (45%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 268 RGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTG 426
RGIT+ A + + + +ID P H F + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 49.6 bits (113), Expect = 2e-06
Identities = 44/148 (29%), Positives = 62/148 (41%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 268 RGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFEXGIS 447
RGITI A + + IID P H F + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 448 XNGQTREHALLAFTLGVKQLIVGVNKMD 531
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.3 bits (85), Expect = 0.005
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAER 264
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 265 ERGITIDIALWKFETXK-YYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFEXG 441
R T+D+ + + +ID P H I+ ++ ++ D A++I+ G
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG----- 108
Query: 442 ISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIKKIG 609
QT EH LLA ++I+ +NK D E + + E K+V +K +G
Sbjct: 109 --IQPQTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 36.7 bits (81), Expect = 0.014
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIXKF-------EKEAXEMGK 216
M +++ N+ VI HVD GKST T L+ K G I K +F ++ +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 217 GSFKYAWVLDKLKAERERG----ITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTS 384
+ + L+K E +G T+++ K + + + +ID+P H F +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 385 QADCAVLIVXAGTG 426
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 36.3 bits (80), Expect = 0.019
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIXKF-------EKEAXEMGK 216
M +++ N+ VI HVD GKST T L+ K G I K +F ++ +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 217 GSFKYAWVLDKLKAERERG----ITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTS 384
+ + L+K E +G T+++ K + + + +ID+P H F +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 385 QADCAVLIVXAGTG 426
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 36.3 bits (80), Expect = 0.019
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 11/189 (5%)
Frame = +1
Query: 58 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIXKFEKEAXEMGKGSFK 228
P K+ + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 229 YAWVL------DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTS-- 384
+L + + +D + K VT ID H ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTIFGMTGH 250
Query: 385 QADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 564
D +L++ A G G T+EH LA +L V +V V K+D E
Sbjct: 251 MPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETM 302
Query: 565 EEIXKEVSS 591
+ I + V S
Sbjct: 303 KNITRLVRS 311
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 34.3 bits (75), Expect = 0.077
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 319 YVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
+V+ +D P H + M+ G + D A L+V AG QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLV-AGNEP-----CPQPQTSEHLAAVEIMQL 181
Query: 499 KQLIVGVNKMDSTEPPYSEPRFEEI 573
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.18
Identities = 52/202 (25%), Positives = 79/202 (39%), Gaps = 12/202 (5%)
Frame = +1
Query: 58 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIXKFEKEAXEMGKGSFK 228
P K+ + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 229 YAWVL------DKLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQ- 387
+L + + +D + K VT ID H ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTIFGMHRP 250
Query: 388 --ADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 561
+ +L++ A G G T+EH LA +L V +V V K+D P Y
Sbjct: 251 YARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMC-PAYI--- 298
Query: 562 FEEIXKEVSSYIKKIGYNPAAV 627
EE K ++ ++ P V
Sbjct: 299 LEETMKNITRLVRSAKKLPILV 320
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 70 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLD 246
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 247 KLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIV 411
+ E+ RGIT+ + + +ID+P H F + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 70 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLD 246
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 247 KLKAERERGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIV 411
+ E+ RGIT+ + + +ID+P H F + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 31.9 bits (69), Expect = 0.41
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 8/183 (4%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKA 258
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 259 ERERGITIDIALWKF----ETXKYYVTIIDAPXHRXFIKNMITGTS--QADCAVLIVXAG 420
RG ++ A E VT+ID + K I G + A L+V A
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 421 TGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIXKEVSSYIK 600
+ GI+ TREH L L + ++ + KMD + ++I K+VS+ +
Sbjct: 285 ----DRGITW--ATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 601 KIG 609
K G
Sbjct: 334 KAG 336
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.94
Identities = 27/113 (23%), Positives = 45/113 (39%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 268 RGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTG 426
+ + I + Y + IID P H F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.94
Identities = 27/113 (23%), Positives = 45/113 (39%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 268 RGITIDIALWKFETXKYYVTIIDAPXHRXFIKNMITGTSQADCAVLIVXAGTG 426
+ + I + Y + IID P H F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 524 LFTPTMSCLTPRVKASKACSRV*PXLEIPXSNSPVPAXTMSTA 396
LF PT+SC+ + AS S P + P +N VP T+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAP-ANDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 328 IIDAPXHRXFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGVKQL 507
IID P H F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 508 IVGVNKMDSTEPPYSEPR 561
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTT 135
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 166 DKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
+KR + EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 166 DKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
+KR + EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,393,805
Number of Sequences: 27780
Number of extensions: 243195
Number of successful extensions: 661
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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