Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C13
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1214 - 27061794-27062178,27063018-27063766,27064427-27064831     30   1.8  
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915...    28   7.4  
07_01_0920 + 7749937-7750264,7750416-7750546,7751686-7751747,775...    28   7.4  

>12_02_1214 - 27061794-27062178,27063018-27063766,27064427-27064831
          Length = 512

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 241 QVIIFLYEHVFRLFVQLEDHLLCQL*WYR-EQPLKQCKSSVMIEYIAGYQLYRCS 80
           Q+++ L   +  L  +LED  +  L  +  E+PL+  K ++ I Y++ Y++  CS
Sbjct: 145 QLLVALGHRILELVEKLEDFDIILLPSFELERPLQLAKEAIGIMYLSPYEVGTCS 199


>07_03_0699 +
           20772415-20773450,20789050-20789606,20790971-20791567,
           20792258-20792413
          Length = 781

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +1

Query: 460 VRGGGVHSLHEVR-HGETEAAIFILQRFLSLRPGHNGQLDVLLHRTGVLRHXD 615
           V   G  +LH V  HG  E A  I +R  SL    N  L   LH      H D
Sbjct: 417 VTSNGSTALHVVASHGHAELAALICERAPSLAATRNRSLGTPLHCASKAGHRD 469


>07_01_0920 +
           7749937-7750264,7750416-7750546,7751686-7751747,
           7752007-7752070
          Length = 194

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 568 QLDVLLHRTGVLRHXDGPRVPA 633
           + D+L HR G LRH  GPR+P+
Sbjct: 154 EFDILGHRLG-LRHHRGPRLPS 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,915,992
Number of Sequences: 37544
Number of extensions: 324674
Number of successful extensions: 879
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)