Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C11
         (371 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W199 Cluster: CG4326-PA; n=7; Endopterygota|Rep: CG43...    40   0.011
UniRef50_A6LWK8 Cluster: Putative uncharacterized protein; n=1; ...    35   0.54 
UniRef50_UPI00015B583A Cluster: PREDICTED: similar to GA18111-PA...    32   3.8  
UniRef50_A0CSH7 Cluster: Chromosome undetermined scaffold_26, wh...    31   8.8  

>UniRef50_Q9W199 Cluster: CG4326-PA; n=7; Endopterygota|Rep:
           CG4326-PA - Drosophila melanogaster (Fruit fly)
          Length = 155

 Score = 40.3 bits (90), Expect = 0.011
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +1

Query: 31  KAPPRGWQDGKKDFTSKPTYTKFHVFDENDPYGI 132
           KAPPRG  +G KDFT   TY K+H   ++ P+ +
Sbjct: 122 KAPPRGRLEGTKDFTHGETYIKYHEDGKDQPFAV 155


>UniRef50_A6LWK8 Cluster: Putative uncharacterized protein; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Putative
           uncharacterized protein - Clostridium beijerinckii NCIMB
           8052
          Length = 507

 Score = 34.7 bits (76), Expect = 0.54
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 120 IIFIKNMELCVCWF-RSKIFFAILPTSRW 37
           I+FI N ELC CW  ++KIF++     +W
Sbjct: 251 ILFIGNNELCACWIEQNKIFYSFFNNEQW 279


>UniRef50_UPI00015B583A Cluster: PREDICTED: similar to GA18111-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA18111-PA - Nasonia vitripennis
          Length = 165

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 43  RGWQDGKKDFTSKPTYTKFHVFDENDP 123
           RG  + K+DFT KP Y K++  D NDP
Sbjct: 135 RGSLEDKRDFTHKPAYKKYYE-DPNDP 160


>UniRef50_A0CSH7 Cluster: Chromosome undetermined scaffold_26, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_26,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 281

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +1

Query: 4   VKRLHSTTTKAPPRGWQDGKKDFTSKPTYTKFHVFDENDPYGI*FHNIHLVKLVNIM-QI 180
           ++R++  +TK   +  Q  ++D  SK  Y    ++DEND     F++ +   + NI+ +I
Sbjct: 84  IQRVNKQSTKGQKK--QTLERDLQSKKRYVSHQIYDENDEN---FYD-YESNIENIIEEI 137

Query: 181 LVVKKCNY 204
           ++ +KCN+
Sbjct: 138 ILSQKCNF 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,669,599
Number of Sequences: 1657284
Number of extensions: 3797305
Number of successful extensions: 8355
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8355
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)