Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C11
         (371 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0100 + 6594787-6594878,6595443-6595728,6595809-6595887,659...    29   0.88 

>05_02_0100 +
           6594787-6594878,6595443-6595728,6595809-6595887,
           6595964-6596013,6597281-6597478,6597555-6597612,
           6598388-6598496,6599253-6599321,6599684-6599812,
           6599970-6600082,6600386-6600479,6602827-6602917,
           6604145-6604233,6604715-6604856,6605849-6606196,
           6606314-6607408
          Length = 1013

 Score = 29.5 bits (63), Expect = 0.88
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 143 LWNQIPYGSFSSKTWN 96
           +WN IP G F+S+ WN
Sbjct: 285 IWNNIPSGDFASENWN 300


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,909,874
Number of Sequences: 37544
Number of extensions: 98960
Number of successful extensions: 191
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)