Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C08
         (340 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0)               27   2.9  
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)                    27   3.9  
SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7)                  27   5.1  
SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)                     26   9.0  

>SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0)
          Length = 893

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 257 CTSILRKFSGRQHCVTVDCCCHGSPTP 337
           C + L+ + GR+   T +CC   +PTP
Sbjct: 691 CEATLKAYDGRRPSQTSNCCEKTAPTP 717


>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
          Length = 786

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = -2

Query: 300 TQCCRPLNFRSMLVQQRLCFP-------AAIPAELKPEHREPLMESTDPQC 169
           T   R ++ R +LV  RLC         + +   L+PEH + L++ +DP C
Sbjct: 228 TIAVRAMHVR-LLVTSRLCMMFFTVESFSLVLTALEPEHAKTLLQKSDPNC 277


>SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7)
          Length = 534

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -2

Query: 204 REPL-MESTDPQCHILQHRRPRLPLMQLEAPCSFNFCSLRAI 82
           REP    S  PQ H+L  +R  L + ++   CS   CS+  I
Sbjct: 58  REPFDSRSKLPQKHLLNSKRRALAIAKILLACSPEHCSMSFI 99


>SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)
          Length = 956

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 231 IPAELKPEHREPLMESTDPQ 172
           I A+L+PE REPLM  + P+
Sbjct: 706 ICAKLRPEKREPLMAPSFPE 725


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,495,339
Number of Sequences: 59808
Number of extensions: 164942
Number of successful extensions: 374
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 485763447
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)