Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C08
         (340 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    29   2.0  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    29   2.0  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    29   2.0  

>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 281 SGRQHCVTVDCCCHGSPTP 337
           SGR HCV   C CH  P P
Sbjct: 572 SGRGHCVCGACECHKRPNP 590


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 281 SGRQHCVTVDCCCHGSPTP 337
           SGR HCV   C CH  P P
Sbjct: 572 SGRGHCVCGACECHKRPNP 590


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 281 SGRQHCVTVDCCCHGSPTP 337
           SGR HCV   C CH  P P
Sbjct: 572 SGRGHCVCGACECHKRPNP 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,165,162
Number of Sequences: 53049
Number of extensions: 257915
Number of successful extensions: 743
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)