Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_C05
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative... 79 2e-15
At1g65560.1 68414.m07437 allyl alcohol dehydrogenase, putative s... 79 3e-15
At5g16990.1 68418.m01990 NADP-dependent oxidoreductase, putative... 76 2e-14
At5g16960.1 68418.m01987 NADP-dependent oxidoreductase, putative... 76 2e-14
At3g03080.1 68416.m00304 NADP-dependent oxidoreductase, putative... 76 2e-14
At5g16970.1 68418.m01988 NADP-dependent oxidoreductase, putative... 75 5e-14
At5g38000.1 68418.m04576 NADP-dependent oxidoreductase, putative... 74 1e-13
At5g37980.1 68418.m04574 NADP-dependent oxidoreductase, putative... 73 2e-13
At5g37940.1 68418.m04570 NADP-dependent oxidoreductase, putative... 72 3e-13
At1g26320.1 68414.m03210 NADP-dependent oxidoreductase, putative... 71 7e-13
At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative... 68 6e-12
At3g59845.1 68416.m06678 NADP-dependent oxidoreductase, putative... 64 1e-10
At1g01600.1 68414.m00077 cytochrome P450, putative similar to cy... 30 1.5
At3g12040.1 68416.m01494 DNA-3-methyladenine glycosylase (MAG) i... 29 2.7
At3g23660.1 68416.m02975 transport protein, putative similar to ... 28 4.7
At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein ... 28 4.7
At1g13640.1 68414.m01603 phosphatidylinositol 3- and 4-kinase fa... 28 4.7
At5g07620.1 68418.m00873 protein kinase family protein contains ... 28 6.2
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 28 6.2
At2g21970.1 68415.m02610 stress enhanced protein 2 (SEP2) nearly... 28 6.2
At3g07760.2 68416.m00944 expressed protein 27 8.2
At3g07760.1 68416.m00943 expressed protein 27 8.2
>At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 345
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/152 (33%), Positives = 69/152 (45%)
Frame = +3
Query: 198 DPYLRAYNSYQAVPYDQFSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTP 377
DP A A F Y V V++S +Y G + GW ++ V TP T +
Sbjct: 62 DPSTAALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMH-- 119
Query: 378 KDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQ 557
+K+ + S G +GMPG TAY GF E+C PK LVGQ
Sbjct: 120 ----FKIQHTD-IPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQ 174
Query: 558 IAXIKGCRVIXFAGTDDKVKWLEEELGFDKAF 653
A + GC V+ AG+ +KV L+ + GFD AF
Sbjct: 175 FAKMMGCYVVGSAGSTEKVDLLKTKFGFDDAF 206
>At1g65560.1 68414.m07437 allyl alcohol dehydrogenase, putative
similar to allyl alcohol dehydrogenase from Nicotiana
tabacum [gi:6692816]; similar to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 350
Score = 78.6 bits (185), Expect = 3e-15
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Frame = +3
Query: 174 LKAEWISVDPYLRA-----YNSYQA--VPYDQFS-YQVGVVVQSRDSNYPVGTRVVAHKG 329
+K ++S DPY+R + SY VP + + + V+ S D+NY G V G
Sbjct: 48 VKNLYLSCDPYMRGRMRDFHGSYLPPFVPGQRIEGFGLARVIDSDDTNYKPGDIVSGIIG 107
Query: 330 WCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXX 509
W ++ + S R +L D LS LG+ +GM G TAY GF EIC PK
Sbjct: 108 WEEYSLLRSSDNLQL---RNIQLDDDIPLSYHLGL--LGMAGFTAYAGFNEICCPKKGDS 162
Query: 510 XXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKVKWLEEELGFDKAF 653
LVGQ+A + GC V+ AG+ KV+ L+ ELG+D+AF
Sbjct: 163 VFVSAACGAVGQLVGQLAKLHGCYVVGSAGSKQKVEILKNELGYDEAF 210
>At5g16990.1 68418.m01990 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 343
Score = 76.2 bits (179), Expect = 2e-14
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Frame = +3
Query: 174 LKAEWISVDPYLRAY------NSYQAVPYDQ----FSYQVGVVVQSRDSNYPVGTRVVAH 323
+K ++S DPY+R+ +S A Y + Y V V++S +Y G +
Sbjct: 42 VKNLYLSCDPYMRSRMGKPDPSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGI 101
Query: 324 KGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXX 503
GW ++ V TP + +K+ + S G +GMPG TAY GF E+C PK
Sbjct: 102 VGWEEYSVITPMAHMH------FKIQHTD-VPLSYYTGLLGMPGMTAYAGFYEVCSPKKG 154
Query: 504 XXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKVKWLEEELGFDKAF 653
LVGQ A + GC V+ AG+ +KV L+ + GFD AF
Sbjct: 155 ETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAF 204
>At5g16960.1 68418.m01987 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana
Length = 346
Score = 76.2 bits (179), Expect = 2e-14
Identities = 48/133 (36%), Positives = 63/133 (47%)
Frame = +3
Query: 255 YQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGV 434
+ V V+ S S+Y G + GW ++ V TP PN +K+ S
Sbjct: 82 FGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPI--PNLH----FKIHHTN-FPLSYYT 134
Query: 435 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKV 614
G +GMPG TAY GF EIC PK LVGQ A + GC V+ AG+ +KV
Sbjct: 135 GLLGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKV 194
Query: 615 KWLEEELGFDKAF 653
L+ + GFD AF
Sbjct: 195 DLLKNKFGFDDAF 207
>At3g03080.1 68416.m00304 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana; similar to allyl alcohol
dehydrogenase [Nicotiana tabacum] GI:6692816
Length = 350
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/135 (34%), Positives = 63/135 (46%)
Frame = +3
Query: 249 FSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSL 428
+ + V V+ S +Y G + GW ++ + TP YK+ + S
Sbjct: 85 YGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLITPDFSH-------YKIQHTD-VPLSY 136
Query: 429 GVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDD 608
G +GMPG TAY GF EIC PK LVGQ A I GC V+ AG+++
Sbjct: 137 YTGLLGMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKIMGCYVVGSAGSNE 196
Query: 609 KVKWLEEELGFDKAF 653
KV L+ + GFD AF
Sbjct: 197 KVDLLKNKFGFDDAF 211
>At5g16970.1 68418.m01988 NADP-dependent oxidoreductase, putative
(P1) identical to probable NADP-dependent oxidoreductase
P1, zeta-crystallin homolog [SP|Q39172][gi:886428],
Arabidopsis thaliana; similar to allyl alcohol
dehydrogenase [Nicotiana tabacum] GI:6692816; contains
Pfam profile PF00107: oxidoreductase, zinc-binding
dehydrogenase family
Length = 345
Score = 74.5 bits (175), Expect = 5e-14
Identities = 44/133 (33%), Positives = 64/133 (48%)
Frame = +3
Query: 255 YQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGV 434
Y V +++S +Y G + W ++ V TP T + +K+ + S
Sbjct: 81 YGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAH------FKIQHTD-VPLSYYT 133
Query: 435 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKV 614
G +GMPG TAY GF E+C PK LVGQ+A + GC V+ AG+ +KV
Sbjct: 134 GLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV 193
Query: 615 KWLEEELGFDKAF 653
L+ + GFD AF
Sbjct: 194 DLLKTKFGFDDAF 206
>At5g38000.1 68418.m04576 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana
Length = 353
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/133 (33%), Positives = 62/133 (46%)
Frame = +3
Query: 255 YQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGV 434
+ V + S NY G + GW ++ V TP TP +K+ + S
Sbjct: 89 FGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITP-----TPSSH-FKIHHTD-VPLSFYT 141
Query: 435 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKV 614
G +G+PG TAY GF EIC PK LVGQ A + GC V+ A +++KV
Sbjct: 142 GLLGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSEEKV 201
Query: 615 KWLEEELGFDKAF 653
L+ + G+D AF
Sbjct: 202 DLLKTKFGYDDAF 214
>At5g37980.1 68418.m04574 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana
Length = 353
Score = 72.5 bits (170), Expect = 2e-13
Identities = 44/133 (33%), Positives = 62/133 (46%)
Frame = +3
Query: 255 YQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGV 434
+ V + S NY G + GW ++ V TP TP +K+ + S
Sbjct: 89 FGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITP-----TPSSH-FKIHHTD-VPLSFYT 141
Query: 435 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKV 614
G +G+PG TAY GF EIC PK LVGQ A + GC V+ A + +KV
Sbjct: 142 GLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKV 201
Query: 615 KWLEEELGFDKAF 653
L+ + G+D+AF
Sbjct: 202 DLLKTKFGYDEAF 214
>At5g37940.1 68418.m04570 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428],
Arabidopsis thaliana
Length = 353
Score = 72.1 bits (169), Expect = 3e-13
Identities = 44/133 (33%), Positives = 61/133 (45%)
Frame = +3
Query: 255 YQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGV 434
+ V + S NY G + GW ++ V TP TP +K+ + S
Sbjct: 89 FGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITP-----TPSSH-FKIHHTD-VPLSFYT 141
Query: 435 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKV 614
G +G+PG TAY GF EIC PK LVGQ A + GC V+ A + +KV
Sbjct: 142 GLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKV 201
Query: 615 KWLEEELGFDKAF 653
L+ + G+D AF
Sbjct: 202 DLLKTKFGYDDAF 214
>At1g26320.1 68414.m03210 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; similar
to allyl alcohol dehydrogenase GI:9758497 from
[Arabidopsis thaliana]
Length = 351
Score = 70.9 bits (166), Expect = 7e-13
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Frame = +3
Query: 174 LKAEWISVDPYLRA-------YNSYQAVPYDQFSYQVGV----VVQSRDSNYPVGTRVVA 320
+K ++S DPY+R +S PY +G+ V+ S +Y G +
Sbjct: 49 VKNLYLSCDPYMRICMGKPDPLSSSLVPPYKTGVPIIGLGVSKVIDSGHPDYKKGDLLWG 108
Query: 321 HKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKX 500
GW ++ V T +T + +K+ + S G +GMPG TAY GF E+C PK
Sbjct: 109 LVGWEEYSVITLTTYSH------FKIEHTD-VPLSYYTGLLGMPGMTAYAGFYEVCSPKK 161
Query: 501 XXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKVKWLEEELGFDKAF 653
LVGQ A + GC V+ AG+ +KV L+ + GFD AF
Sbjct: 162 GETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVYLLKTKFGFDDAF 212
>At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 239
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = +3
Query: 435 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKV 614
G +GMPG TAY GF EIC PK LVGQ A + GC V+ AG+ +KV
Sbjct: 28 GLLGMPGMTAYVGFYEICSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKV 87
Query: 615 KWLEEELGFDKAF 653
L+ + GFD AF
Sbjct: 88 DLLKTKFGFDYAF 100
>At3g59845.1 68416.m06678 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; allyl
alcohol dehydrogenase - Nicotiana tabacum, EMBL:AB036735
Length = 346
Score = 63.7 bits (148), Expect = 1e-10
Identities = 41/131 (31%), Positives = 56/131 (42%)
Frame = +3
Query: 261 VGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGA 440
V V+ S D ++ G + W + P+ I+K+ + S G
Sbjct: 87 VSQVIDSDDPSFTKGDMIWGIVNWEEFSTINPAA--------IFKIDVNINVPLSYYTGI 138
Query: 441 VGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAXIKGCRVIXFAGTDDKVKW 620
+GM G TAY GF EIC PK LVGQ A + GC V+ AG+ KV
Sbjct: 139 LGMIGLTAYAGFFEICSPKKGDTVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKQKVDL 198
Query: 621 LEEELGFDKAF 653
L + G+D AF
Sbjct: 199 LLNKFGYDDAF 209
>At1g01600.1 68414.m00077 cytochrome P450, putative similar to
cytochrome P450 GI:10442763 from [Triticum aestivum]
Length = 554
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 582 VIXFAGTDDKVKWLEEELGFDK 647
+I GTDD W EE LGFD+
Sbjct: 342 LIETRGTDDVASWTEEPLGFDE 363
>At3g12040.1 68416.m01494 DNA-3-methyladenine glycosylase (MAG)
identical to DNA-3-methlyadenine glycosylase (MAG)
SP:Q39147 from [Arabidopsis thaliana]; contains Pfam
profile: PF02245 methylpurine-DNA glycosylase (MPG)
Length = 254
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 376 GVLGCVLGVKT*WSHHPL 323
G +G LG+ T WSHHPL
Sbjct: 179 GKVGQALGLSTEWSHHPL 196
>At3g23660.1 68416.m02975 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 765
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 476 LRNLQAKSWRDRGGHRSGRCCGI 544
L LQ+ W + GHRS RC G+
Sbjct: 247 LDELQSDQWPVKPGHRSQRCTGV 269
>At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein
(FLA8)
Length = 420
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 481 SKKPK*AVAPGIPTAPTPSDGDNP 410
SK P A AP TAPTPS D P
Sbjct: 335 SKSPSPAPAPEPVTAPTPSPADAP 358
>At1g13640.1 68414.m01603 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 622
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 366 PNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAY 467
PN PK + K GL PS+ VG G AY
Sbjct: 195 PNNPKGFVGKALGQPGLKPSVRVGETGFREVAAY 228
>At5g07620.1 68418.m00873 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 359
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 134 EFVIPPLIDGEVLA*SRMDQRRPVFKGLQ--LLPSCTLRPVQLSSRCCCP 277
EF +P + VL D RP G L C L+ QL+ CC P
Sbjct: 289 EFYLPDFMRNAVLDHRLSDLYRPEILGSDDNLSEECVLKYFQLAMSCCSP 338
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 530 GRSGDHHGLASFWLAD 483
G S HHGL +FW+AD
Sbjct: 768 GLSDKHHGLNNFWVAD 783
>At2g21970.1 68415.m02610 stress enhanced protein 2 (SEP2) nearly
identical to stress enhanced protein 2; SEP2
(GI:7384980) [Arabidopsis thaliana]
Length = 202
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 387 IYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICK 491
++K D++GLS ++G G M G A F +L I +
Sbjct: 130 LFKKLDVEGLSEAIGAGLAAM-GCAAMFAWLTISR 163
>At3g07760.2 68416.m00944 expressed protein
Length = 125
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 385 VFINYQICRDCRR---RWA*GRLGCRARLPILVS*KSASQKLARPWWSP 522
VF QI RR +W C+ I V+ Q++ RPWW+P
Sbjct: 51 VFTTEQILHFIRRHHMKWGDFITLCKELRRIKVACLKGEQRVRRPWWAP 99
>At3g07760.1 68416.m00943 expressed protein
Length = 125
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 385 VFINYQICRDCRR---RWA*GRLGCRARLPILVS*KSASQKLARPWWSP 522
VF QI RR +W C+ I V+ Q++ RPWW+P
Sbjct: 51 VFTTEQILHFIRRHHMKWGDFITLCKELRRIKVACLKGEQRVRRPWWAP 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,403,378
Number of Sequences: 28952
Number of extensions: 268243
Number of successful extensions: 649
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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